| Protein: | AIM6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 390 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..390] | [1..390] |
|
|
3.0E-97 | [99..383] | [23..274] |
|
Region A: Residues: [1-390] |
1 11 21 31 41 51
| | | | | |
1 MLGLKGCLTI LIGYVIAVCA LFSSRGRNPS LTDWEKLKDQ KISDIDNFGL TGQHLLEFFQ 60
61 ENLPFLSFSE EKYRHKHVSL YYDVFKEYIL RRASSKKCLP VDSAIAKLNK DVNPMPVHSH 120
121 NDYWRKLPLF EGLAYGASST EADVWNIDEK ILAVGHNEAY LDPVELTLDK LYTGPLLEIL 180
181 DEVNCQDSDA DRKNGVFFNS PETSLFFYID FKSDDNELTY KLLMEQYFKS LIDSGYLTYY 240
241 DMKKDEIIWR PVTVILTGNY PTSLDILDNG NDNGYFESSQ RFAFLDAPLL SLEPKYSKLS 300
301 VAATVSFSQL MKHCGSDHWK VSLRGRMDSN EISCAKSIID GAHALKLKTR IWGAPTWPAN 360
361 LVETISRQII HDLGSDLLNL DNLFMASSLI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-390] |
1 11 21 31 41 51
| | | | | |
1 NKDVNPMPVH SHNDYWRKLP LFEGLAYGAS STEADVWNID EKILAVGHNE AYLDPVELTL 60
61 DKLYTGPLLE ILDEVNCQDS DADRKNGVFF NSPETSLFFY IDFKSDDNEL TYKLLMEQYF 120
121 KSLIDSGYLT YYDMKKDEII WRPVTVILTG NYPTSLDILD NGNDNGYFES SQRFAFLDAP 180
181 LLSLEPKYSK LSVAATVSFS QLMKHCGSDH WKVSLRGRMD SNEISCAKSI IDGAHALKLK 240
241 TRIWGAPTWP ANLVETISRQ IIHDLGSDLL NLDNLFMASS LI
|
| Detection Method: | |
| Confidence: | 1.48 |
| Match: | 1xx1A |
| Description: | Structural basis for ion-coordination and the catalytic mechanism of sphingomyelinases D |
Matching Structure (courtesy of the PDB): |
|
