Protein: | BRE4 |
Organism: | Saccharomyces cerevisiae |
Length: | 1125 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BRE4.
Description | E-value | Query Range |
Subject Range |
|
1232.0 | [0..21] | [1123..25] |
|
960.0 | [0..17] | [1123..4] |
|
801.0 | [0..15] | [1123..2] |
|
499.0 | [0..6] | [1123..159] |
|
282.0 | [0..147] | [326..27] |
|
185.0 | [0..686] | [1123..606] |
|
85.0 | [0..680] | [1040..991] |
|
76.0 | [0..37] | [107..70] |
|
68.0 | [0..808] | [1033..948] |
Region A: Residues: [1-103] |
1 11 21 31 41 51 | | | | | | 1 MKRYERDRSP TPDPDIVKGS YSQTSLRSLH ELNYKNPAGI SGLSFAGSPQ QSVASLSQMR 60 61 LENLVKDKHW EEVEDFGLEE LRDGFFDAAF TKPDSKARSP NSD |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.489 | a.29.12 | Description not found. |
View | Download | 0.380 | a.40.1 | Calponin-homology domain, CH-domain |
View | Download | 0.375 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
View | Download | 0.345 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
View | Download | 0.302 | a.3.1 | Cytochrome c |
View | Download | 0.302 | a.3.1 | Cytochrome c |
View | Download | 0.281 | a.64.1 | Saposin |
View | Download | 0.258 | a.79.1 | Antitermination factor NusB |
View | Download | 0.239 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
Region A: Residues: [104-341] |
1 11 21 31 41 51 | | | | | | 1 IDDDNGAARK KLQSGFTKLS EYVWTAIYRP IIHFPRDIRK NGVSIFKFFI AYFIAIVICV 60 61 IRPSGRWIGH EFRYFLPIAV LIHHPVRNIG VQLEMTISSI IGASFGLGWS ALAWYISTAT 120 121 KPTANYQGGI LFQSLTMALL FAIWLRSVYR RFFYFTTSFS ISIIFTHTVR LASSKFDLKW 180 181 QIFWDFGISY LFGLLLSLLV CVCVSPHSGN AELMEHYNKC LQTTKTFLMA LVDTELIK |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [342-1125] |
1 11 21 31 41 51 | | | | | | 1 SKEQIYLAQV KMVKTLNIDL SQGFRDFVNQ LTISRFDLQS LKSLRNSLTA METSLRVLPI 60 61 APKIFNDDEL KKMYEELEKY RSDSATLSKE ASASPQSSGI PTRENTPSAF KPIGPGLLKN 120 121 EIYINALKAS FSKSIFNLIL EMIFVLENLS RVLKKYESPN QKNNLDECVK ILSHSHSKLK 180 181 RKIYKLDVCY RDFVNSSFFS QELLNDEESV DIFLFLRYLR NSARQLVTVI HDCQVLGENI 240 241 HWRIALPSYP LSRALTRLPK QCVLDEGAGN VLHYFEAKRD VDEIFERVYN TYTSRHKYNK 300 301 GEEEALRLDS QGGDEKSQNR KNHTISIRAI DHNDFNFHTT QNPWRFKLWK LSRILSGDEC 360 361 KWTLKITFCM IFLCLPTWLP ESYHWYQEFH CWWAPLTFYL LAHRRYSGNW ALVMRRLICG 420 421 IVGIFWGWAA NQSRHFGSPY VVCTFAGLIV VPFSINFLVY RNTKSSFTAL MCFTIIALEP 480 481 YSKPNRHYNL TTAGIWKSTW VTGLALIIGI LVSIPINWIV WPFRARTELR DSMSSLLAHL 540 541 GQSYQTVADR YLYRDADDAP TDLTFAFSHI REVRLTQSLE AIRELLKKAR HEPIIISNFN 600 601 PEKYASLINS CQFLLSKIIE ARISGAFFEI WDQDFDIETT RALLSLRRDS VSSVIFVFYI 660 661 LSNCFRSKNK IPRYLPNPIM SRKKLYHFIK KFSEMKDQSH SNLNSGGNSM EKNLFKKIYQ 720 721 QKASSSGQQQ LPLPSVANSS EIDSEKMHWT EVHGIAFARA FTDISEALFQ VESCAKDILG 780 781 EENF |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.