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View Structure Prediction Details

Protein: YDL206W
Organism: Saccharomyces cerevisiae
Length: 762 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL206W.

Description E-value Query
Range
Subject
Range
YDL206W - Putative protein of unknown function; YDL206W is not an essential protein
YD206_YEAST - Putative cation exchanger YDL206W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL206...
0.0 [1..762] [1..762]
ncx-9 - status:Partially_confirmed UniProt:O16242 protein_id:AAB65309.1
3.0E-79 [320..762] [215..648]
NCKX1_RAT - Sodium/potassium/calcium exchanger 1 OS=Rattus norvegicus GN=Slc24a1 PE=2 SV=1
4.0E-63 [16..286] [401..664]
NCKX1_BOVIN - Sodium/potassium/calcium exchanger 1 OS=Bos taurus GN=SLC24A1 PE=1 SV=2
3.0E-62 [23..282] [438..687]
gi|21450183, gi|... - gi|21450183|ref|NP_659062.1| solute carrier family 24 (sodium/potassium/calcium exchanger), member 1...
4.0E-62 [16..286] [401..664]
gi|18913078 - gi|18913078|gb|AAL79511.1| cation-exchanger protein 1 [Tetrahymena thermophila]
9.0E-62 [355..757] [188..586]
SLC24A1 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
2.0E-59 [23..287] [444..699]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKPLRWLIT IAFYVSNVIL IGYSLSSNGS ISEFYLHSVV LIECFSLLGV VTSDCLTPSL  60
   61 SYISSNIFHI SDRVSGMTLL ALGNALPDIT STYQSMKSGV TSLAIGELFG GIFFLLTVVI 120
  121 GLMGCVATIQ FQHDKSIETY TEESFDQNLS YDRSNYILDV GIFTFMLLVS GTFLADGRLY 180
  181 FWECIVMVLT YCCCAVYLIK SYKYPCEIND ALEREVEIKK TVLAN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.259637
Match: PF01699
Description: Sodium/calcium exchanger protein

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [226-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHITVPNRFT LTTTSDITST DDGIRYVRPL GDTQIDEDNA ISLDPTRLPS KSLDNISRFN  60
   61 QGIPERRDLI RRRIRGYLRS HYHGWVRMTL QDLLNIWEKQ NLFNNTVKSL SL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.501 N/A N/A a.118.8 TPR-like
View Download 0.378 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.362 N/A N/A a.24.17 Group V grass pollen allergen
View Download 0.319 N/A N/A a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.304 N/A N/A f.17.1 F1F0 ATP synthase subunit C
View Download 0.302 N/A N/A a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.286 N/A N/A a.4.6 C-terminal effector domain of the bipartite response regulators
View Download 0.253 N/A N/A a.85.1 Hemocyanin, N-terminal domain
View Download 0.243 N/A N/A a.24.1 Apolipoprotein
View Download 0.217 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.205 N/A N/A a.77.1 DEATH domain
View Download 0.202 N/A N/A a.118.11 Cytochrome c oxidase subunit E
View Download 0.200 N/A N/A a.1.1 Globin-like

Predicted Domain #3
Region A:
Residues: [338-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSDDTHLFTK ASLDEEGRPL IRKRMNSLQP KDFYKYLSLR NGENSNALDT AISAPQNEYQ  60
   61 TYYNEPTSLF LTVPQKKTSK KSLSCDRIPN LVRSNNIILN DEATRTQEST NALNSISDVI 120
  121 DNSLLQYERD DIILDRTLSL CSTKSRTAWH SFQLYNYLTD VSLEIGFFEF LSLLVTTPVS 180
  181 IILYLSIPSE ISQTDHDLPL SYLQNIQLIA SPIILNQLIT NNFSFWLLIL SLVIAILLYF 240
  241 KTRTIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [584-762]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKFNSDIIFT VAFLLSLACL SKAVHIIVVT LTHWINVFNI SETILGLTIF TWGNSIGDLV  60
   61 SNITFVKIGV LEIAIGACFG SPLLYFLFGV GFDGIMIMLG DKTGKIVSGR DSNILMHHID 120
  121 FKVDKNLINT GVGILIAFLI FTVLIPLNDW KIDKKISIAL LTLYIVVTCI SVFLEVHQV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.958607
Match: PF01699
Description: Sodium/calcium exchanger protein

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle