| Protein: | ACK1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 623 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACK1.
| Description | E-value | Query Range |
Subject Range |
|
|
252.0 | [0..217] | [623..52] |
|
|
236.0 | [0..217] | [623..389] |
|
|
234.0 | [0..128] | [622..60] |
|
|
229.0 | [0..128] | [622..17] |
|
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228.0 | [0..218] | [622..123] |
|
|
227.0 | [0..130] | [622..19] |
|
|
225.0 | [0..172] | [622..11] |
|
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223.0 | [0..128] | [622..17] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MVNQGQPQPN LYDKHINMFP PARARESSHK LGNANSDRHG LPAQNIVPAP YPVDDSIVEL 60
61 TPAIPFTSPS SSSSLSLPLS ALNFTDGNAD GGQLGTPVTI NSNNGMDIFN SKPTGEIGYA 120
121 NNGTNSTGSR YELPFNFSST KESLG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [146-361] |
1 11 21 31 41 51
| | | | | |
1 SPAVQDASIS SGNRISESVR DNSAPPPYEE SESRILQEKV YRTEEKAPIR PLNNNPVPPQ 60
61 KINQPPTGSA KTDDNGSSGG EDKLSSYSPE ALAFYQVYKK TITDSSKFTP EIQMQWCETL 120
121 LTYAFNEDFI SQYNINAEKL KRSLKPEEML KNQKVILEHS FKVLTKLITL KWPPAMYLMG 180
181 TLYSHQPYLP IKNKNIVIKN DEKALEYYCK AAKLNN
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [362-481] |
1 11 21 31 41 51
| | | | | |
1 SDACYRAGVC FEYQRGTSSL DPSPTKEQCI KKAFQYYQHG AEVCSNSACM YKLGMSHLYG 60
61 LNMQKTDVLL AIKWFDKAAQ KGDSPQTLYE LGKIYEFSVL PPEIQNLLFA NGIRKDSQLA 120
121
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [482-623] |
1 11 21 31 41 51
| | | | | |
1 IKYYQQCAKD FEYPLAQWKL GNCYEFGDLG LPVVAKKSIY WYSKAAAAQP KGNPMAMLSL 60
61 SGWYLTGAPN ILKPNNKEAF NWALKSSKCS DGKLARTEFA LGFYYEKGVG CEVDLDLAKQ 120
121 YYQRAARMGF RKAVDALRSL TN
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1ihgA |
| Description: | Cyclophilin 40; Cyclophilin 40 isomerase domain |
Matching Structure (courtesy of the PDB): |
|
