| Protein: | VCX1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 411 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VCX1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-78 | [9..403] | [47..438] |
|
|
4.0E-75 | [1..411] | [1..411] |
|
|
9.0E-69 | [26..403] | [57..432] |
|
|
5.0E-66 | [9..405] | [19..409] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MDATTPLLTV ANSHPARNPK HTAWRAAVYD LQYILKASPL NFLLVFVPLG LIWGHFQLSH 60
61 TLTFLFNFLA IIPLAAILAN ATEELADKAG NTIGGLLNAT FGNAVELIVS IIALKKGQVR 120
121 IVQASMLGSL LSNLLLVLGL CFIFGGYNRV QQTFNQTAAQ TMSSLLAIAC ASLLIPAAFR 180
181 ATLPHGKEDH FIDGKILELS RGTSIVILIV YVLFLYFQLG SHHALFEQQE EETDEVMS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [239-411] |
1 11 21 31 41 51
| | | | | |
1 TISRNPHHSL SVKSSLVILL GTTVIISFCA DFLVGTIDNV VESTGLSKTF IGLIVIPIVG 60
61 NAAEHVTSVL VAMKDKMDLA LGVAIGSSLQ VALFVTPFMV LVGWMIDVPM TLNFSTFETA 120
121 TLFIAVFLSN YLILDGESNW LEGVMSLAMY ILIAMAFFYY PDEKTLDSIG NSL
|
| Detection Method: | |
| Confidence: | 3.677781 |
| Match: | PF01699 |
| Description: | Sodium/calcium exchanger protein |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
