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View Structure Prediction Details

Protein: OPI6
Organism: Saccharomyces cerevisiae
Length: 108 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OPI6.

Description E-value Query
Range
Subject
Range
YDL094C - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental a...
YD094_YEAST - Putative uncharacterized protein YDL094C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
125.0 [0..29] [102..2]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYCEANPPKC TSSNTTLSGH AKPCNLMTAV KTARQATNSF SLRVTMVRNE ANSALGSVTI  60
   61 KGLTGPCLIS SSGTGSSCST RLYVFSSDMT VLVAVSCFLI GSSDTTSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.549 d.18.1 ssDNA-binding transcriptional regulator domain
View Download 0.530 d.18.1 ssDNA-binding transcriptional regulator domain
View Download 0.505 b.1.1 Immunoglobulin
View Download 0.505 b.1.1 Immunoglobulin
View Download 0.494 b.1.2 Fibronectin type III
View Download 0.475 b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.475 b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.414 b.1.1 Immunoglobulin
View Download 0.411 b.1.1 Immunoglobulin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle