YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GPM2
Organism: Saccharomyces cerevisiae
Length: 311 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPM2.

Description E-value Query
Range		 Subject
Range
GPM2 - Homolog of Gpm1p phosphoglycerate mutase, which converts 3-phosphoglycerate to 2-phosphoglycerate in...
gi|207346896 - gi|207346896|gb|EDZ73250.1| YDL021Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190405038 - gi|190405038|gb|EDV08305.1| phosphoglycerate mutase 2 [Saccharomyces cerevisiae RM11-1a]
PMG2_YEAST - Phosphoglycerate mutase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPM2 PE=1 SV=1
 7.0E-81 [1..311] [1..311]
gi|387016 - gi|387016|gb|AAA60073.1| phosphoglycerate mutase [Homo sapiens]
 1.0E-72 [8..309] [2..253]
PGAM2_MOUSE - Phosphoglycerate mutase 2 OS=Mus musculus GN=Pgam2 PE=1 SV=3
 3.0E-72 [9..309] [3..253]
PGAM2_RAT - Phosphoglycerate mutase 2 OS=Rattus norvegicus GN=Pgam2 PE=1 SV=2
 7.0E-72 [8..309] [2..253]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 1.0E-70 [11..309] [5..253]
gi|8248819 - gi|8248819|gb|AAB19888.2| phosphoglycerate mutase type B subunit [Rattus sp.]
 4.0E-70 [11..309] [5..253]

Back

Predicted Domain #1
Region A:
Residues: [1-311] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASTPSNVM TLFLLRHGQS ELNHENIFCG WIDAKLTEKG KEQARHSAEL IEQYCKANNL  60
   61 RLPQIGYTSR LIRTQQTIET MCEEFKLKPQ LQVVYDFNKI KLGDEFGSDD KDNMKIPILQ 120
  121 TWRLNERHYG SWQGQRKPNV LKEYGKDKYM FIRRDYEGKP PPVDLDREMI QQENEKGSST 180
  181 GYEFKEPNRQ IKYELECSNH DIVLPDSESL REVVYRLNPF LQNVILKLAN QYDESSCLIV 240
  241 GHGSSVRSLL KILEGISDDD IKNVDIPNGI PLVVELDKNN GLKFIRKFYL DPESAKINAE 300
  301 KVRNEGFIKN P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 498.228787
Match: 1bq3D_
Description: Phosphoglycerate mutase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoglycerate mutase activity 3.38777226675734 bayes_pls_golite062009
phosphofructokinase activity 3.23286891159765 bayes_pls_golite062009
fructose-2,6-bisphosphate 2-phosphatase activity 2.79017097989614 bayes_pls_golite062009
6-phosphofructo-2-kinase activity 2.66778782568695 bayes_pls_golite062009
acid phosphatase activity 2.30852687504184 bayes_pls_golite062009
hydrolase activity 2.03142958239384 bayes_pls_golite062009
carbohydrate kinase activity 1.86382423322759 bayes_pls_golite062009
carbohydrate phosphatase activity 1.56016941506609 bayes_pls_golite062009
binding 1.50412762608586 bayes_pls_golite062009
catalytic activity 1.37714494241232 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.05740895199147 bayes_pls_golite062009
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity 1.02570448989802 bayes_pls_golite062009
phosphatase activity 0.977262057801137 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 0.916759493094631 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.780670874345357 bayes_pls_golite062009
isomerase activity 0.275500708652009 bayes_pls_golite062009
protein binding 0.236742803345453 bayes_pls_golite062009
intramolecular transferase activity 0.22072573159348 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.116796724149401 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle