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View Structure Prediction Details

Protein: YDL011C
Organism: Saccharomyces cerevisiae
Length: 107 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDL011C.

Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKLSSTDA MGCWSPTFCF ISLISSSTSE LPLFVVEVGI AAYSLEDPPA ILSILVLNAL  60
   61 EVSSFISTVK KFAFCATKNT NNNNSVVMLK ILAFLLLEGI IIKLFLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.788 a.7.1 Spectrin repeat
View Download 0.775 a.24.17 Group V grass pollen allergen
View Download 0.762 a.24.17 Group V grass pollen allergen
View Download 0.743 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.681 a.24.4 Hemerythrin
View Download 0.661 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.651 a.47.2 t-snare proteins
View Download 0.648 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.625 a.46.1 Methionine synthase domain
View Download 0.619 a.24.3 Cytochromes
View Download 0.594 a.29.4 RecG, N-terminal domain
View Download 0.565 a.68.1 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
View Download 0.545 f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.533 a.158.1 F-box domain
View Download 0.530 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.528 a.7.8 GAT domain
View Download 0.525 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.492 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.480 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.476 a.47.2 t-snare proteins
View Download 0.467 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.450 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.446 d.79.3 L30e-like
View Download 0.439 a.118.11 Cytochrome c oxidase subunit E
View Download 0.438 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.436 a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.425 a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.421 a.85.1 Hemocyanin, N-terminal domain
View Download 0.420 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.417 a.29.2 Bromodomain
View Download 0.413 a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.413 d.41.2 Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain
View Download 0.410 a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.407 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.405 a.25.1 Ferritin-like
View Download 0.401 a.118.1 ARM repeat
View Download 0.395 a.63.1 Apolipophorin-III
View Download 0.394 a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.394 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.393 a.11.2 Second domain of FERM
View Download 0.392 a.8.3 Families 57/38 glycoside transferase middle domain
View Download 0.391 d.81.1 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
View Download 0.389 d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.387 c.9.1 Barstar (barnase inhibitor)
View Download 0.386 a.22.1 Histone-fold
View Download 0.380 a.29.2 Bromodomain
View Download 0.380 d.87.2 CO dehydrogenase flavoprotein C-terminal domain-like
View Download 0.379 a.4.6 C-terminal effector domain of the bipartite response regulators
View Download 0.376 a.7.1 Spectrin repeat
View Download 0.374 a.7.7 BAG domain
View Download 0.372 a.8.3 Families 57/38 glycoside transferase middle domain
View Download 0.369 a.69.2 Ypt/Rab-GAP domain of gyp1p
View Download 0.365 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.361 i.11.1 Computational models partly based on NMR data
View Download 0.353 a.24.3 Cytochromes
View Download 0.348 d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.342 a.118.8 TPR-like
View Download 0.339 a.7.4 Smac/diablo
View Download 0.338 a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.334 a.7.5 Tubulin chaperone cofactor A
View Download 0.332 a.4.5 "Winged helix" DNA-binding domain
View Download 0.332 a.69.3 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
View Download 0.327 a.8.2 Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
View Download 0.327 a.118.13 Arp2/3 complex 16 kDa subunit ARPC5
View Download 0.316 a.1.1 Globin-like
View Download 0.315 d.228.1 Replication modulator SeqA, C-terminal DNA-binding domain
View Download 0.304 a.141.1 Frizzled cystein-rich domain
View Download 0.304 a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.302 a.7.5 Tubulin chaperone cofactor A
View Download 0.302 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.301 a.26.1 4-helical cytokines
View Download 0.301 a.2.3 Chaperone J-domain
View Download 0.301 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.300 a.4.5 "Winged helix" DNA-binding domain
View Download 0.300 a.24.9 alpha-catenin/vinculin
View Download 0.298 a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.296 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.296 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.293 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.292 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.281 a.7.6 Ribosomal protein S20
View Download 0.280 a.12.1 Kix domain of CBP (creb binding protein)
View Download 0.279 a.39.3 Cloroperoxidase
View Download 0.275 a.181.1 Antibiotic binding domain of TipA-like multidrug resistance regulators
View Download 0.273 a.118.9 ENTH/VHS domain
View Download 0.272 a.64.1 Saposin
View Download 0.270 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.269 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.269 a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.267 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.263 a.60.10 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
View Download 0.263 a.73.1 Retrovirus capsid protein, N-terminal core domain
View Download 0.258 a.25.2 Thermoplasma ferritin-like 4-helical bundle
View Download 0.257 g.45.1 Pyk2-associated protein beta ARF-GAP domain
View Download 0.253 f.32.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
View Download 0.251 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.251 a.1.1 Globin-like
View Download 0.247 f.31.1 Photosystem I reaction center subunit XI, PsaL
View Download 0.243 d.110.4 SNARE-like
View Download 0.243 a.57.1 Protein HNS-dependent expression A; HdeA
View Download 0.242 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.238 a.54.1 Domain of early E2A DNA-binding protein, ADDBP
View Download 0.234 a.75.1 Ribosomal protein S7
View Download 0.234 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.227 a.61.1 Retroviral matrix proteins
View Download 0.223 a.19.1 Fertilization protein
View Download 0.223 d.54.1 Enolase N-terminal domain-like
View Download 0.216 a.133.1 Phospholipase A2, PLA2
View Download 0.216 d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain
View Download 0.210 a.24.1 Apolipoprotein
View Download 0.210 a.61.1 Retroviral matrix proteins
View Download 0.209 f.1.5 Exotoxin A, middle domain
View Download 0.206 a.25.1 Ferritin-like
View Download 0.201 d.17.4 NTF2-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle