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View Structure Prediction Details

Protein: YDL009C
Organism: Saccharomyces cerevisiae
Length: 107 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDL009C.

Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALSVLCFH NPFKRCLGQK SFFVGDSFFI PTPKRLVLGK LRLSNYTAFH DLIIHDLFIY  60
   61 IFILNFFFFP FCNNFNYWKV FHVAQPRIYH HSRLVMILKV SLECAVS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.693 a.246.2 Description not found.
View Download 0.640 a.69.4 Description not found.
View Download 0.597 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.595 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.595 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.583 a.79.1 Antitermination factor NusB
View Download 0.572 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.569 d.203.1 DsrC, the gamma subunit of dissimilatory sulfite reductase
View Download 0.453 a.74.1 Cyclin-like
View Download 0.439 a.77.1 DEATH domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle