Protein: | MED2 |
Organism: | Saccharomyces cerevisiae |
Length: | 431 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED2.
Description | E-value | Query Range |
Subject Range |
|
176.0 | [0..69] | [430..2088] |
|
169.0 | [0..40] | [430..860] |
|
137.0 | [0..82] | [396..42] |
Region A: Residues: [1-132] |
1 11 21 31 41 51 | | | | | | 1 MVVQNSPVSS VHTANFSERG SNTRTMTYKN KLTVCFDDIL KVGAEMMMQQ QLKNVQLDSY 60 61 LVNGFSQSQQ KLLKEKVKLF HGILDDLETS LSQSSSYLET LTALGKEKEK EREEAEKKRA 120 121 EQENMRKVRE QE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.831 | a.24.9 | alpha-catenin/vinculin |
Region A: Residues: [133-206] |
1 11 21 31 41 51 | | | | | | 1 ELKKRQELEE ASQQQQLQQN SKEKNGLGLN FSTTAPANTT DANGSKENYQ ELGSLQSSSQ 60 61 TQLENANAAN NGAA |
Region A: Residues: [207-286] |
1 11 21 31 41 51 | | | | | | 1 FSPLTTTRIQ SQQAQPSDVM FNDLNSMDIS MFSGLDSTGF DSTAFNATVD ETKGFDDNDS 60 61 GNNYNDINIS SIENNINNNI |
Region A: Residues: [287-356] |
1 11 21 31 41 51 | | | | | | 1 NSTKNGKDNN NESNKNNNGD EKNKNNNEDN ENNNNSSEKN NNNNNNNNNN NDDNGNNNNN 60 61 NSGNDNNNTT |
Region A: Residues: [357-431] |
1 11 21 31 41 51 | | | | | | 1 NNDSNNKNNS ITTGNDNENI VNNDLPTTVV SNPGDNPPPA DNGEEYLTLN DFNDLNIDWS 60 61 TTGDNGELDL SGFNI |