| Protein: | PTC6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 442 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTC6.
| Description | E-value | Query Range |
Subject Range |
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8.0E-96 | [1..442] | [1..442] |
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3.0E-68 | [108..438] | [22..315] |
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1.0E-67 | [108..438] | [22..315] |
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2.0E-67 | [89..425] | [1..343] |
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2.0E-67 | [108..436] | [22..313] |
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2.0E-67 | [108..441] | [22..318] |
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4.0E-67 | [108..436] | [22..313] |
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Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MRLGNAYAYC KPSQNVGLKL DLLRGLPGYV GHATSRINRL ENQDNYSIKM MRSWPNAYGS 60
61 ALNCSVFDGH GEKGAQLSQL LADKLCSSLD FPE
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.444 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.511 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.449 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.494 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.466 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.436 | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.422 | a.3.1 | Cytochrome c |
| View | Download | 0.422 | a.22.1 | Histone-fold |
| View | Download | 0.400 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.380 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.375 | a.24.4 | Hemerythrin |
| View | Download | 0.370 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.367 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.357 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.348 | d.74.4 | Prokaryotic AspRS, insert domain |
| View | Download | 0.341 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.338 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.329 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.322 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.317 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.315 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.309 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.303 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.289 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.287 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.274 | a.24.4 | Hemerythrin |
| View | Download | 0.263 | d.95.2 | Homing endonucleases |
| View | Download | 0.263 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.260 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.260 | d.41.5 | Molybdopterin synthase subunit MoaE |
| View | Download | 0.259 | a.74.1 | Cyclin-like |
| View | Download | 0.259 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.257 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.257 | a.112.1 | Description not found. |
| View | Download | 0.254 | a.1.1 | Globin-like |
| View | Download | 0.253 | a.4.1 | Homeodomain-like |
| View | Download | 0.234 | a.7.7 | BAG domain |
| View | Download | 0.233 | d.26.1 | FKBP-like |
| View | Download | 0.224 | a.112.1 | Description not found. |
| View | Download | 0.223 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.222 | d.52.2 | GMP synthetase C-terminal dimerisation domain |
| View | Download | 0.222 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.211 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.204 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.201 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
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Region A: Residues: [94-442] |
1 11 21 31 41 51
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1 PSWDKQDLKK LVQEYARRFP EGNYWKHKLS TFEKFYNKFI KNCNSKQELL LMKEGDSAIL 60
61 GQNGGRMIFD KMGNIIDKIA LLTELDRLRL FYGFARFDLD QCCGLGTAAG STASSIFLYP 120
121 YDDPNAPIDE GKDDDSWIIS HSGLLKLIVT QVGDSKIILC DQDGIAHALT TTHHINSSRE 180
181 RHRLSIDPSR LDPDAFGETR FLNNFANTRS FGDVAGKPYG ISSEPDIFSF LVGNTLHLPR 240
241 SERSKLPFNG DECFLALVTD GITNKLADQE VVDLITSTVN SWGLKKATPQ FVAEETIKFI 300
301 QAIATKHSDN ATCVVVRLSN WGNWPNVDRT GPQRETKLMN AQSNETKLN
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| Detection Method: | |
| Confidence: | 68.0 |
| Match: | 1a6q__ |
| Description: | Protein serine/threonine phosphatase 2C, C-terminal domain; Protein serine/threonine phosphatase 2C, catalytic domain |
Matching Structure (courtesy of the PDB): |
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