YRC Public Data Repository - Protein Structure Prediction

Protein:	SOL2
Organism:	Saccharomyces cerevisiae
Length:	315 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SOL2.

Description	E-value	Query Range	Subject Range
gi\|151943886 - gi\|151943886\|gb\|EDN62186.1\| suppressor of los1-1 [Saccharomyces cerevisiae YJM789] SOL2_YEAST - 6-phosphogluconolactonase-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN... SOL2 - Protein with a possible role in tRNA export; shows similarity to 6-phosphogluconolactonase non-catal...	1.0E-97	[1..315]	[1..315]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	3.0E-97	[1..315]	[1..315]
6PGL5_ARATH - Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1	2.0E-72	[31..300]	[55..325]
gi\|14009294 - gi\|14009294\|gb\|AAK50346.1\| putative 6-phosphogluconolactonase [Brassica carinata]	2.0E-69	[55..300]	[7..258]
GNPI2_MOUSE - Glucosamine-6-phosphate isomerase 2 OS=Mus musculus GN=Gnpda2 PE=1 SV=1	8.0E-67	[59..313]	[5..258]
gi\|15930199 - gi\|15930199\|gb\|AAH15532.1\| Glucosamine-6-phosphate deaminase 2 [Homo sapiens]	2.0E-66	[59..313]	[5..257]

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Predicted Domain #1

Region A:
Residues: [1-315]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTVPKIFA FHEFSDVAEA VADHVVHAQD GALAPKNERK HSVPNISMNA LDMTREASCK  60
   61 STASAAEGKS GSSGSGSGSS KPKKEKRFKI ALSGGSLIEV LHEGLLKRDD VRWGDWDIYF 120
  121 ADERLVPFSS NESNYGCAKR KILDLIDTAK YGTPKVYHID ESLIDDPQEC ADNYEKVLIR 180
  181 GFAGRDSVKL PMFDLFLLGC APDGHIASLF PNFQDNLREK LAWVVPVENA PSGPSTRISL 240
  241 TIPVICHSHR VTFVVEGATK APIIKTIMER PEKGLPSSIV NEGAAGRVSW FVDDDALTDV 300
  301 LVTKKKYKFH QGLSI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	66.0
Match:	1d9tA_
Description:	No description for 1d9tA_ was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits