| Protein: | BUD23 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 275 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUD23.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-70 | [1..275] | [1..275] |
|
|
1.0E-67 | [3..275] | [7..281] |
|
|
5.0E-67 | [3..275] | [7..281] |
|
|
2.0E-60 | [3..275] | [4..276] |
|
|
2.0E-59 | [1..275] | [1..268] |
|
|
2.0E-58 | [4..275] | [8..283] |
|
|
1.0E-54 | [2..275] | [3..289] |
|
Region A: Residues: [1-202] |
1 11 21 31 41 51
| | | | | |
1 MSRPEELAPP EIFYNDSEAH KYTGSTRVQH IQAKMTLRAL ELLNLQPCSF ILDIGCGSGL 60
61 SGEILTQEGD HVWCGLDISP SMLATGLSRE LEGDLMLQDM GTGIPFRAGS FDAAISISAI 120
121 QWLCNADTSY NDPKQRLMRF FNTLYAALKK GGKFVAQFYP KNDDQVDDIL QSAKVAGFSG 180
181 GLVVDDPESK KNKKYYLVLS SG
|
| Detection Method: |  |
| Confidence: | 52.741366 |
| Match: | 1d2gA_ |
| Description: | Glycine N-methyltransferase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [203-275] |
1 11 21 31 41 51
| | | | | |
1 APPQGEEQVN LDGVTMDEEN VNLKKQLRQR LKGGKDKESA KSFILRKKEL MKRRGRKVAK 60
61 DSKFTGRKRR HRF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.367 | a.4.1 | Homeodomain-like |
| View | Download | 0.354 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.464 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.436 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.399 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.324 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.319 | a.3.1 | Cytochrome c |
| View | Download | 0.313 | b.9.1 | Neurophysin II |
| View | Download | 0.310 | a.77.1 | DEATH domain |
| View | Download | 0.302 | a.4.1 | Homeodomain-like |
| View | Download | 0.288 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.278 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.267 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.266 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.255 | a.4.1 | Homeodomain-like |
| View | Download | 0.246 | d.58.49 | YajQ-like |
| View | Download | 0.234 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.217 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.216 | a.28.1 | ACP-like |
| View | Download | 0.214 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.213 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.208 | a.180.1 | N-terminal, cytoplasmic domain of anti-sigmaE factor RseA |
| View | Download | 0.206 | a.112.1 | Description not found. |
