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View Structure Prediction Details

Protein: HTL1
Organism: Saccharomyces cerevisiae
Length: 78 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HTL1.

Description E-value Query
Range
Subject
Range
gi|44983503 - gi|44983503|gb|AAS52639.1| AEL046Wp [Ashbya gossypii ATCC 10895]
gi|45190561, gi|... - gi|45190561|ref|NP_984815.1| AEL046Wp [Ashbya gossypii ATCC 10895], gi|44983503|gb|AAS52639.1| AEL04...
46.0 [0..19] [78..8]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNNTISSM NPERAYNNVT LKNLTAFQLL SQRENICELL NLVESTERHN SIINPERQRM  60
   61 SLEEMKKMLD ALKNERKK

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.680 a.64.2 Bacteriocin AS-48
View Download 0.666 a.64.2 Bacteriocin AS-48
View Download 0.578 a.8.9 Description not found.
View Download 0.574 a.74.1 Cyclin-like
View Download 0.574 a.74.1 Cyclin-like
View Download 0.513 a.74.1 Cyclin-like
View Download 0.513 a.74.1 Cyclin-like
View Download 0.506 a.60.1 SAM/Pointed domain
View Download 0.491 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.451 a.74.1 Cyclin-like
View Download 0.424 a.74.1 Cyclin-like
View Download 0.380 a.74.1 Cyclin-like
View Download 0.350 a.74.1 Cyclin-like
View Download 0.341 a.4.1 Homeodomain-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle