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View Structure Prediction Details

Protein: YCR018C-A
Organism: Saccharomyces cerevisiae
Length: 84 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCR018C-A.

Description E-value Query
Range
Subject
Range
YO106_YEAST - Putative uncharacterized protein YOL106W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
YOL106W - [DUBIOUS] Dubious open reading frame unlikely to encode a functional protein, based on available exp...
102.0 [0..3] [83..22]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSHENHVNF QIVVGIPLLI KAVILCIQNI LEVLLEDIGI LKMESIFLHT NITIIPHSVL  60
   61 YVSLSYYIIN PCTSASSNFD DSFS

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.730 d.58.7 RNA-binding domain, RBD
View Download 0.622 d.58.4 Dimeric alpha+beta barrel
View Download 0.612 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.594 d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.554 c.44.2 Enzyme IIB-cellobiose
View Download 0.486 d.15.1 Ubiquitin-like
View Download 0.466 d.57.1 DNA damage-inducible protein DinI
View Download 0.432 a.4.5 "Winged helix" DNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle