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View Structure Prediction Details

Protein: YCR015C
Organism: Saccharomyces cerevisiae
Length: 317 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCR015C.

Description E-value Query
Range
Subject
Range
YCQ5_YEAST - UPF0655 protein YCR015C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR015C PE=3 SV=...
gi|207347328 - gi|207347328|gb|EDZ73535.1| YCR015Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190406449 - gi|190406449|gb|EDV09716.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|151943834 - gi|151943834|gb|EDN62134.1| conserved protein [Saccharomyces cerevisiae YJM789]
YCR015C - Putative protein of unknown function; YCR015C is not an essential gene
0.0 [1..317] [1..317]
YNZC_SCHPO - UPF0655 protein C17G9.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC17G9.12c PE=...
SPBC17G9.12c - conserved fungal protein
3.0E-67 [4..236] [2..210]

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Predicted Domain #1
Region A:
Residues: [1-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTIIISDFD ETITRVDTIC TIAKLPYLLN PRLKPEWGHF TKTYMDGYHK YKYNGTRSLP  60
   61 LLSSGVPTII SQSNFNKLFA DELKYQNHNR VVELNSVNEI TKQQIFKSIS LDQMKTFARD 120
  121 QNHEDCLLRD GFKTFCSSVV KNFESDFYVL SINWSKEFIH EVIGDRRLKN SHIFCNDLKK 180
  181 VSDKCSQSYN GEFDCRLLTG SDKVKILGEI LDKIDSGCNK EGNSCSYWYI GDSETDLLSI 240
  241 L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted functions:

Term Confidence Notes
hydrolase activity 1.53784828281997 bayes_pls_golite062009
catalytic activity 1.43937506049289 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [242-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPSTNGVLLI NPQENPSKFI KITEKIIGIP KDKISSFEAD NGPAWLQFCE KEGGKGAYLV  60
   61 KSWDSLKDLI MQVTKM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.704 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.625 c.47.1 Thioredoxin-like
View Download 0.608 a.36.1 Signal peptide-binding domain
View Download 0.542 a.36.1 Signal peptide-binding domain
View Download 0.530 a.4.1 Homeodomain-like
View Download 0.473 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.430 a.60.2 RuvA domain 2-like
View Download 0.426 a.46.1 Methionine synthase domain
View Download 0.421 a.130.1 Chorismate mutase II
View Download 0.411 a.4.5 "Winged helix" DNA-binding domain
View Download 0.395 d.51.1 Eukaryotic type KH-domain (KH-domain type I)
View Download 0.386 c.9.1 Barstar (barnase inhibitor)
View Download 0.374 d.15.1 Ubiquitin-like
View Download 0.371 d.15.1 Ubiquitin-like
View Download 0.370 d.15.1 Ubiquitin-like
View Download 0.365 c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.355 a.4.1 Homeodomain-like
View Download 0.345 c.59.1 MurD-like peptide ligases, peptide-binding domain
View Download 0.343 a.112.1 Description not found.
View Download 0.342 c.47.1 Thioredoxin-like
View Download 0.339 a.4.1 Homeodomain-like
View Download 0.339 a.2.2 Ribosomal protein L29 (L29p)
View Download 0.330 d.14.1 Ribosomal protein S5 domain 2-like
View Download 0.323 d.15.4 2Fe-2S ferredoxin-like
View Download 0.310 d.15.1 Ubiquitin-like
View Download 0.310 a.76.1 Iron-dependent represor protein, dimerization domain
View Download 0.303 a.4.11 RNA polymerase subunit RPB10
View Download 0.291 a.74.1 Cyclin-like
View Download 0.290 a.181.1 Antibiotic binding domain of TipA-like multidrug resistance regulators
View Download 0.288 a.6.1 Putative DNA-binding domain
View Download 0.286 a.65.1 Annexin
View Download 0.280 a.20.1 PGBD-like
View Download 0.267 a.77.1 DEATH domain
View Download 0.263 a.20.1 PGBD-like
View Download 0.262 d.94.1 HPr-like
View Download 0.260 b.1.18 E set domains
View Download 0.259 d.56.1 GroEL-intermediate domain like
View Download 0.252 c.47.1 Thioredoxin-like
View Download 0.239 d.51.1 Eukaryotic type KH-domain (KH-domain type I)
View Download 0.232 c.47.1 Thioredoxin-like
View Download 0.230 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.226 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.225 d.40.1 CI-2 family of serine protease inhibitors
View Download 0.224 a.4.13 Sigma3 and sigma4 domains of RNA polymerase sigma factors
View Download 0.221 a.60.5 Barrier-to-autointegration factor, BAF
View Download 0.220 a.57.1 Protein HNS-dependent expression A; HdeA
View Download 0.218 a.112.1 Description not found.
View Download 0.213 a.58.1 Chemotaxis receptor methyltransferase CheR, N-terminal domain
View Download 0.210 a.60.4 DNA repair protein Rad51, N-terminal domain
View Download 0.202 c.47.1 Thioredoxin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle