| Protein: | CDC10 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 322 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC10.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-96 | [8..320] | [25..335] |
|
|
2.0E-96 | [8..320] | [25..335] |
|
|
1.0E-95 | [5..313] | [117..425] |
|
Region A: Residues: [1-244] |
1 11 21 31 41 51
| | | | | |
1 MDPLSSVQPA SYVGFDTITN QIEHRLLKKG FQFNIMVVGQ SGLGKSTLIN TLFASHLIDS 60
61 ATGDDISALP VTKTTEMKIS THTLVEDRVR LNINVIDTPG FGDFIDNSKA WEPIVKYIKE 120
121 QHSQYLRKEL TAQRERFITD TRVHAILYFL QPNGKELSRL DVEALKRLTE IANVIPVIGK 180
181 SDTLTLDERT EFRELIQNEF EKYNFKIYPY DSEELTDEEL ELNRSVRSII PFAVVGSENE 240
241 IEIN
|
| Detection Method: |  |
| Confidence: | 22.09691 |
| Match: | 1egaA_ |
| Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [245-322] |
1 11 21 31 41 51
| | | | | |
1 GETFRGRKTR WSAINVEDIN QCDFVYLREF LIRTHLQDLI ETTSYIHYEG FRARQLIALK 60
61 ENANSRSSAH MSSNAIQR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.707 | 0.078 | axial cellular bud site selection | a.2.3 | Chaperone J-domain |
| View | Download | 0.638 | 0.053 | axial cellular bud site selection | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.572 | 0.008 | axial cellular bud site selection | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.579 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.560 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.544 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.543 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.531 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.506 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.492 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.492 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.485 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.473 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.470 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.466 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.456 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.455 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.450 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.449 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.444 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.442 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.441 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.415 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.410 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.406 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.405 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.394 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.393 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.382 | N/A | N/A | f.28.1 | Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.382 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.381 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.380 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.375 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.364 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.363 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.356 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.355 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.349 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.347 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.347 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.343 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.340 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.332 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.331 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.329 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.327 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.322 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.321 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.321 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.318 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.317 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.316 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.315 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.315 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.315 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.315 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.309 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.309 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.303 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.302 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.300 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.297 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.297 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.290 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.290 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.287 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.285 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.284 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.281 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.277 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.276 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.273 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.272 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.267 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.267 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.266 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.265 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.261 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.260 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.259 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.258 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.255 | N/A | N/A | d.192.1 | YlxR-like |
| View | Download | 0.254 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.254 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.254 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.254 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.253 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.249 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.247 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.247 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.245 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.245 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.244 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.243 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.243 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.243 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.241 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.239 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.239 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.239 | N/A | N/A | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.236 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.236 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.231 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.229 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.228 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.227 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.224 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.224 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.224 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.224 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.222 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.222 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.222 | N/A | N/A | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.221 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.217 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.217 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.216 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.215 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.215 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.212 | N/A | N/A | a.30.1 | ROP protein |
| View | Download | 0.211 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.210 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.210 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.210 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.210 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.208 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.208 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.207 | N/A | N/A | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.207 | N/A | N/A | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.206 | N/A | N/A | a.30.1 | ROP protein |
| View | Download | 0.204 | N/A | N/A | a.30.1 | ROP protein |
| View | Download | 0.203 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.202 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.201 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.200 | N/A | N/A | a.2.9 | C-terminal UvrC-binding domain of UvrB |
