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View Structure Prediction Details

Protein: YCR001W
Organism: Saccharomyces cerevisiae
Length: 104 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YCR001W.

Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYLLKKLKH IDSYGESNLS MFYLKFYCPW KLCPLLPILY GRNKSVQNAW SCHKLHRFID  60
   61 FPTPSANMNF FFFIRVCYGT VSLFISTFLK KISFFIYVNF TVYF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.712 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.712 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.695 a.77.1 DEATH domain
View Download 0.657 a.29.14 Description not found.
View Download 0.639 a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.639 a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.612 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.602 a.158.1 F-box domain
View Download 0.580 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle