Protein: | MRC1 |
Organism: | Saccharomyces cerevisiae |
Length: | 1096 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRC1.
Description | E-value | Query Range |
Subject Range |
|
332.0 | [0..177] | [1095..289] |
|
300.0 | [0..13] | [1095..10] |
|
299.0 | [0..660] | [839..1] |
|
276.0 | [0..286] | [1094..207] |
|
140.0 | [0..639] | [1077..803] |
|
124.0 | [0..657] | [1049..789] |
|
86.0 | [0..456] | [852..499] |
|
69.0 | [0..697] | [852..889] |
|
67.0 | [0..711] | [852..984] |
Region A: Residues: [1-242] |
1 11 21 31 41 51 | | | | | | 1 MDDALHALSS LTAKKRTTTY KKVAVPILDE NDNTNGNGPN DIDNPPELTG NGFLFANATL 60 61 NRVKNRLEGK KAPEQNHNNG KDRSENSLPT QLISNLYDGG EELEKSEVKD NSYSEKNVSS 120 121 SFTQTQRIPV SIQQDKVFNV PIHSVNDGKP TQLIKEDGLV NETSQALKTP LTTGRPGATQ 180 181 RIDSSGATSQ TQPIKSIEPQ SQIITTSSNH SNALSPKIPI IPTELIGTSP LFQSIQNRGP 240 241 DT |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [243-564] |
1 11 21 31 41 51 | | | | | | 1 QMDVPPQTAH DEDKTQAIGI PQATHQEQKT QIDTVAQTLQ DEVPHTLKIR EIQSELASED 60 61 SKREKARNVE YKKPQKPIPT KKFFSKESFL ADFDDSSSNE DDDIKLENAH PKPVQNDDEL 120 121 HENKSVELNL TDETRINEKR VPLLSSYANN LKREIDSSKC ITLDLDSDSD EYGDDDMDSI 180 181 KLSKDESVLP ISQLSKATIL NLKARLSKQN QKLSQRPNKS KDPKVDHNVL LNTLRKASRK 240 241 QILDHQKEVI ETKGLKLEDM AKEKEIVENL LEQEILRNKR IRQKEKRREK LEENDFQLNA 300 301 HDSGSDSGSE SSGFALSGNE IA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [565-639] |
1 11 21 31 41 51 | | | | | | 1 DYESSGSEND NRRESDSEKE DDEIILKQKK SHHVKHIINE SDSDTEVEAK PKEKADESLP 60 61 KRIAINLGHY GDNIG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.518 | a.118.1 | ARM repeat |
View | Download | 0.472 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
View | Download | 0.434 | a.4.1 | Homeodomain-like |
View | Download | 0.409 | a.118.8 | TPR-like |
View | Download | 0.408 | d.58.11 | EF-G/eEF-2 domains III and V |
View | Download | 0.408 | d.58.11 | EF-G/eEF-2 domains III and V |
View | Download | 0.405 | a.60.1 | SAM/Pointed domain |
View | Download | 0.404 | a.64.1 | Saposin |
View | Download | 0.393 | a.60.1 | SAM/Pointed domain |
Region A: Residues: [640-893] |
1 11 21 31 41 51 | | | | | | 1 EDTDKFQETN VLDTQNIEEV MAERNTIENE VKDDVYVNEE ADEAIRRQLI DKEKLQLKQK 60 61 EKEHEAKIKE LKKRGVTNFF EMEAEESEDE WHGIGGADGE GSDDYDSDLE KMIDDYSKNN 120 121 FNPHEIREML AAENKEMDIK MINKILYDIK NGGFRNKRAK NSLELELSDD DEDDVLQQYR 180 181 LKRRELMRKR RLEIGDDAKL VKNPKSSAFF ESMVEDIIEY KNPFGAEEEY NLDITSTATD 240 241 LDTQDNSINV GDNT |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [894-1096] |
1 11 21 31 41 51 | | | | | | 1 GNNEQKPVDQ KNKKVIISED FVQKSLSFLK SNNYEDFETD KELSRIQHGN DEAIEDLYTL 60 61 KQNSSIKSFT NSQTDSTTSK TVNTIIDLEK RPEDEDEVEN GDTSLVGVFK HPSIIKSFAS 120 121 RTDINDKFKE GNKTVKILKS YKTVGSSKAS ITYMGKTRKL IAPKRKTEGS HRYHHDHHNK 180 181 KMKMKTKTKS NKLFESGQDS FDN |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.