YRC Public Data Repository - Protein Structure Prediction

Protein:	YCL047C
Organism:	Saccharomyces cerevisiae
Length:	258 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCL047C.

Description	E-value	Query Range	Subject Range
YCL047C - Putative protein of unknown function gi\|151943785 - gi\|151943785\|gb\|EDN62085.1\| conserved protein [Saccharomyces cerevisiae YJM789] gi\|207347389 - gi\|207347389\|gb\|EDZ73579.1\| YCL047Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi\|190406402 - gi\|190406402\|gb\|EDV09669.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] POF1_YEAST - Nicotinamide mononucleotide adenylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...	0.0	[1..258]	[1..258]
POF1L_SCHPO - Putative nicotinamide mononucleotide adenylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ... SPAC694.03 - conserved fungal protein	5.0E-87	[29..243]	[34..233]

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Predicted Domain #1

Region A:
Residues: [1-258]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTFEQFRK SNLLFQVLKG PQHLECQKLF VLDSSFNPPH LAHFQLLSQT IKNFKLKDTR  60
   61 SHVLLLLAVN NADKLPKPAS FPTRLEMMCL FADYLQEKLP QSVVSVGLTV FSKFIDKDKI 120
  121 LHEQFVKGCS ADIGYLVGFD TIARIFDEKY YHPLKISDVM ESFMSGSQLY CLARGDCHLS 180
  181 AESQLRYASD ILEGKFEPVI PREWGARIHV MQNDYPALRN VSSSEIRNKL KNGQVESLKD 240
  241 ELPLCIYDYL INNKTIFD

[Run NCBI BLAST on this sequence.]

Detection Method:	ORFEUS
Confidence:	7.76
Match:	1k4kA
Description:	Nicotinamide mononucleotide (NMN) adenylyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits