| Protein: | EMC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 760 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EMC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..760] | [1..760] |
|
|
0.0 | [168..757] | [312..914] |
|
|
0.0 | [145..757] | [313..945] |
|
|
0.0 | [157..757] | [312..883] |
|
|
8.0E-34 | [157..310] | [48..181] |
|
Region A: Residues: [1-201] |
1 11 21 31 41 51
| | | | | |
1 MKITCTDLVY VFILLFLNTS CVQAVFSDDA FITDWQLANL GPWEKVIPDS RDRNRVLILS 60
61 NPTETSCLVS SFNVSSGQIL FRNVLPFTID EIQLDSNDHN AMVCVNSSSN HWQKYDLHDW 120
121 FLLEEGVDNA PSTTILPQSS YLNDQVSIKN NELHILDEQS KLAEWKLELP QGFNKVEYFH 180
181 REDPLALVLN VNDTQYMGFS A
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.49721450547449 | bayes_pls_golite062009 |
| catalytic activity | 1.30141348136874 | bayes_pls_golite062009 |
| protein binding | 0.418181509648475 | bayes_pls_golite062009 |
|
Region A: Residues: [202-760] |
1 11 21 31 41 51
| | | | | |
1 NGTELIPVWQ RDEWLTNVVD YAVLDVFDSR DVELNKDMKA ELDSNSLWNA YWLRLTTNWN 60
61 RLINLLKENQ FSPGRVFTKL LALDAKDTTV SDLKFGFAKI LIVLTHDGFI GGLDMVNKGQ 120
121 LIWKLDLEID QGVKMFWTDK NHDELVVFSH DGHYLTIEVT KDQPIIKSRS PLSERKTVDS 180
181 VIRLNEHDHQ YLIKFEDKDH LLFKLNPGKN TDVPIVANNH SSSHIFVTEH DTNGIYGYII 240
241 ENDTVKQTWK KAVNSKEKMV AYSKRETTNL NTLGITLGDK SVLYKYLYPN LAAYLIANEE 300
301 HHTITFNLID TITGEILITQ EHKDSPDFRF PMDIVFGEYW VVYSYFSSEP VPEQKLVVVE 360
361 LYESLTPDER LSNSSDNFSY DPLTGHINKP QFQTKQFIFP EIIKTMSISK TTDDITTKAI 420
421 VMELENGQIT YIPKLLLNAR GKPAEEMAKD KKKEFMATPY TPVIPINDNF IITHFRNLLP 480
481 GSDSQLISIP TNLESTSIIC DLGLDVFCTR ITPSGQFDLM SPTFEKGKLL ITIFVLLVIT 540
541 YFIRPSVSNK KLKSQWLIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
