| Protein: | SRO9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 466 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRO9.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-74 | [50..463] | [296..688] |
|
|
9.0E-62 | [14..401] | [71..513] |
|
|
5.0E-59 | [49..453] | [13..437] |
|
|
1.0E-55 | [43..465] | [5..424] |
|
|
2.0E-50 | [100..389] | [3..313] |
|
|
7.0E-44 | [10..292] | [671..947] |
|
|
2.0E-39 | [8..414] | [150..575] |
|
Region A: Residues: [1-279] |
1 11 21 31 41 51
| | | | | |
1 MKIFWDPRSV IEHQDYSGPA NVFHLLFTSL PTMSAETAAA NTATAPVPEV QEQESSKSKQ 60
61 VNLTPAPLPT SSPWKLAPTE IPVSTISIED LDATRKKKNR TPTPKSSTAT KWVPIKASIT 120
121 VSGTKRSGSK NGASNGNSNK SKNNKTAASS TSSSNANRKK KHHQHNAKKQ QQMKKDGFES 180
181 AVGEEDSKDA TSQENGQSTQ QQQPPHHRNH HHSHHHNSNG PQRRKFHNSN NAGMPQNQGF 240
241 PPQFKPYQGR NARNNNNNRS KYHNHFHHNQ QHPQQPMVK
|
| Detection Method: |  |
| Confidence: | 9.55 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [280-466] |
1 11 21 31 41 51
| | | | | |
1 LQQQFYPVQP VLMAINNIAR QIEYYFSEEN LTVDNYLRSK LSKDGFAPLS LISKFYRVVN 60
61 MSFGGDTNLI LAALREIVAN EAATVNVAEG TLAAKEGDNV TGEAKEPSPL DKYFVRSKSW 120
121 SNWLPETFET EINIEKELVG DALDQFMISL PPVPQQEEES STELASQEQE TKEDSAPVAA 180
181 GESESSL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
