YRC Public Data Repository - Protein Structure Prediction

Protein:	YCL022C
Organism:	Saccharomyces cerevisiae
Length:	171 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCL022C.

Description	E-value	Query Range	Subject Range
gi\|6686347 - gi\|6686347\|sp\|P25562.2\|YCC2_YEAST RecName: Full=Putative uncharacterized protein YCL022C YCC2_YEAST - Putative uncharacterized protein YCL022C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...	260.0	[0..1]	[171..1]

Back

Predicted Domain #1

Region A:
Residues: [1-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIILVMLNTR FFNPYCFQPS SSLCRPSYSL FSGILACISS SKILPFENFF KSTLLGGFFT  60
   61 VVGAFTVSLS FLSLSSFKSS SDREAAIFSL SVPFSAPSSM FSPTLLLLLV RLGKVTLEGS 120
  121 LWYRPNPLAF FPWKELKDGS FTTSVGSALF DIGDWFGFLS FMSYSCDMPT P

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits