| Protein: | SGF29 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 259 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGF29.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..259] | [1..259] |
|
|
1.0E-64 | [1..143] | [1..143] |
|
|
2.0E-53 | [1..135] | [1..183] |
|
|
1.0E-36 | [77..236] | [108..264] |
|
|
1.0E-29 | [102..231] | [137..266] |
|
|
6.0E-29 | [102..231] | [137..266] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MDGYWDVVVS SLQDIYNANE VIPFDDELQT KKLNFLNMSK DQLQLHLNTF QEHMENVNRV 60
61 HRILDNVRSN LSLMLNQSRE EKSEENTEDA EEGEGTRMAL SQGKKAVGKV GRSYWTSEYN 120
121 PNAPILVGSE VAYKP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.351 | 0.485 | SAGA complex | a.1.1 | Globin-like |
| View | Download | 0.332 | 0.006 | SAGA complex | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.351 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.332 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.329 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.326 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.310 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.291 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.285 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.280 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.262 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.261 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.257 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.252 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.243 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.225 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.210 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.203 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.203 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.203 | N/A | N/A | a.25.1 | Ferritin-like |
|
Region A: Residues: [136-259] |
1 11 21 31 41 51
| | | | | |
1 RRGSADGEWI QCEVLKVVAD GTRFEVRDPE PDELGNSGKV YKCNRKELLL IPPGFPTKNY 60
61 PPGTKVLARY PETTTFYPAI VIGTKRDGTC RLRFDGEEEV DKETEVTRRL VLPSPTALAN 120
121 LARK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.345 | 0.103 | SAGA complex | b.7.1 | C2 domain (Calcium/lipid-binding domain, CaLB) |
