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View Structure Prediction Details

Protein: YCL007C
Organism: Saccharomyces cerevisiae
Length: 130 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YCL007C.

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELAKERNGP HQKHHGQCQN HCTSPNTVRQ NKTNKLLLVK KKGKLVIWRH IVKKMLHIRL  60
   61 VVLWSHYPEQ HGHGTNHYEY TNNSIAKLDA QRVSRRRRKK REAERRDYDT YKLLITLCSL 120
  121 LFVGPLFLKV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.407 a.3.1 Cytochrome c
View Download 0.407 a.3.1 Cytochrome c
View Download 0.396 a.7.8 GAT domain
View Download 0.396 a.7.8 GAT domain
View Download 0.364 a.48.1 N-terminal domain of cbl (N-cbl)
View Download 0.363 a.24.3 Cytochromes
View Download 0.363 a.24.3 Cytochromes
View Download 0.346 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.345 a.4.5 "Winged helix" DNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle