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View Structure Prediction Details

Protein: YBR300C
Organism: Saccharomyces cerevisiae
Length: 165 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR300C.

Description E-value Query
Range
Subject
Range
YGR293C - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental a...
YG64_YEAST - Putative uncharacterized protein YGR293C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
204.0 [0..1] [121..1]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATPAAIEV SLTIVFVLFF SADVSLTRNS EMKAHTSKMD SYSSSIYMNV LPTSLAQTSY  60
   61 HLAPISHLKC LSVQFSSHIH YSYYYGASVL ERCVFHRSRI RGARFIVPIP FIAFPRHKNV 120
  121 FSQCTYFRRI PLGCLQRCSC SFWPRKSQNQ ICFEPSLRGH LIFVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.404 c.23.1 CheY-like
View Download 0.359 a.1.1 Globin-like
View Download 0.359 b.65.1 Rap30/74 interaction domains
View Download 0.356 a.118.8 TPR-like
View Download 0.333 a.118.1 ARM repeat


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle