| Protein: | CHK1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 527 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHK1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [15..471] | [73..523] |
|
|
0.0 | [9..463] | [87..534] |
|
|
0.0 | [15..479] | [81..539] |
|
|
0.0 | [9..465] | [99..548] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MSLSQVSPLP HIKDVVLGDT VGQGAFACVK NAHLQMDPSI ILAVKFIHVP TCKKMGLSDK 60
61 DITK
|
|
Region B: Residues: [82-96] |
1 11 21 31 41 51
| | | | | |
1 IDCNVSKEYM WIILE
|
| Detection Method: |  |
| Confidence: | 500.616428 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [65-81] |
1 11 21 31 41 51
| | | | | |
1 EVVLQSKCSK HPNVLRL
|
|
Region B: Residues: [97-106] |
1 11 21 31 41 51
| | | | | |
1 MADGGDLFDK
|
|
Region C: Residues: [122-175] |
1 11 21 31 41 51
| | | | | |
1 FQQLVSAINY LHVECGVAHR DIKPENILLD KNGNLKLADF GLASQFRRKD GTLR
|
|
Region D: Residues: [287-307] |
1 11 21 31 41 51
| | | | | |
1 FSGDDGLCND PELLAKKLFS H
|
| Detection Method: | |
| Confidence: | 500.616428 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [107-121] |
1 11 21 31 41 51
| | | | | |
1 IEPDVGVDSD VAQFY
|
|
Region B: Residues: [176-286] |
1 11 21 31 41 51
| | | | | |
1 VSMDQRGSPP YMAPEVLYSE EGYYADRTDI WSIGILLFVL LTGQTPWELP SLENEDFVFF 60
61 IENDGNLNWG PWSKIEFTHL NLLRKILQPD PNKRVTLKAL KLHPWVLRRA S
|
| Detection Method: | |
| Confidence: | 500.616428 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [308-395] |
1 11 21 31 41 51
| | | | | |
1 LKVSLSNENY LKFTQDTNSN NRYISTQPIG NELAELEHDS MHFQTVSNTQ RAFTSYDSNT 60
61 NYNSGTGMTQ EAKWTQFISY DIAALQFH
|
| Detection Method: | |
| Confidence: | 16.045757 |
| Match: | 1iq5A_ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [396-527] |
1 11 21 31 41 51
| | | | | |
1 SDENDCNELV KRHLQFNPNK LTKFYTLQPM DVLLPILEKA LNLSQIRVKP DLFANFERLC 60
61 ELLGYDNVFP LIINIKTKSN GGYQLCGSIS IIKIEEELKS VGFERKTGDP LEWRRLFKKI 120
121 STICRDIILI PN
|
| Detection Method: | |
| Confidence: | 16.045757 |
| Match: | 1iq5A_ |
| Description: | Calmodulin |
| Matching Structure (courtesy of the PDB): |
|
