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View Structure Prediction Details

Protein: SHG1
Organism: Saccharomyces cerevisiae
Length: 142 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SHG1.

Description E-value Query
Range
Subject
Range
gi|49526955 - gi|49526955|emb|CAG60582.1| unnamed protein product [Candida glabrata]
gi|50290427, gi|... - gi|50290427|ref|XP_447645.1| hypothetical protein CAGL0I09174g [Candida glabrata CBS138], gi|4952695...
92.0 [0..5] [138..8]
gi|44985269 - gi|44985269|gb|AAS53982.1| AFR611Cp [Ashbya gossypii ATCC 10895]
gi|44985269, gi|... - gi|45199129|ref|NP_986158.1| AFR611Cp [Ashbya gossypii ATCC 10895], gi|44985269|gb|AAS53982.1| AFR61...
86.0 [0..5] [132..6]
gi|49644315, gi|... - gi|50310319|ref|XP_455179.1| unnamed protein product [Kluyveromyces lactis], gi|49644315|emb|CAG9788...
gi|49644315 - gi|49644315|emb|CAG97886.1| KLLA0F02189p [Kluyveromyces lactis]
71.0 [0..6] [91..14]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYNQEDSKR LSDKYKKEGH FDKLKREILS NPWNNTEENS ESFEQALRKR VASTVKEMVN  60
   61 EDEELIFKNR GLTSALIESQ LVKDNYLKLG SKMEGDNGDG EKKFDLDVYV RSKLQDPKLL 120
  121 EMIKGQLQET LNSYEEEANG ST

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 110.173925
Match: PF05205.3
Description: No description for PF05205.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle