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View Structure Prediction Details

Protein: YBR219C
Organism: Saccharomyces cerevisiae
Length: 127 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR219C.

Description E-value Query
Range
Subject
Range
YBR220C - Putative protein of unknown function; YBR220C is not an essential gene
YB70_YEAST - Uncharacterized membrane protein YBR220C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
161.0 [0..1] [100..459]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLNTLSNF GGTWPRLIIM SMINYFTVYQ CTIPGTNKVY VTHGGSMQAC TELLNGTVTI  60
   61 LRDGYYITNL ICIVVGLFLY FGYLKRKILH LQSLPISSWR FFHFFFTILA VTSRAIYYKS 120
  121 QNWRREC

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.651 d.56.1 GroEL-intermediate domain like
View Download 0.646 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.572 a.1.1 Globin-like
View Download 0.523 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.454 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle