| Protein: | AME1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 324 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AME1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..324] | [1..324] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MDRDTKLAFR LRGSHSRRTD DIDDDVIVFK TPNAVYREEN SPIQSPVQPI LSSPKLANSF 60
61 EFPITTNNVN AQDRHEHGYQ PLDAEDYPMI DS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.428 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.349 | d.120.1 | Cytochrome b5 |
| View | Download | 0.227 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.364 | a.21.1 | HMG-box |
| View | Download | 0.227 | a.64.1 | Saposin |
| View | Download | 0.209 | a.64.2 | Bacteriocin AS-48 |
|
Region A: Residues: [93-324] |
1 11 21 31 41 51
| | | | | |
1 ENKSLISESP QNVRNDEDLT TRYNFDDIPI RQLSSSITSV TTIDVLSSLF INLFENDLIP 60
61 QALKDFNKSD DDQFRKLLYK LDLRLFQTIS DQMTRDLKDI LDINVSNNEL CYQLKQVLAR 120
121 KEDLNQQIIS VRNEIQELKA GKDWHDLQNE QAKLNDKVKL NKRLNDLTST LLGKYEGDRK 180
181 IMSQDSEDDS IRDDSNILDI AHFVDLMDPY NGLLKKINKI NENLSNELQP SL
|
| Detection Method: | |
| Confidence: | 7.48 |
| Match: | 1qoyA |
| Description: | Hemolysin E (HlyE, ClyA, SheA) |
Matching Structure (courtesy of the PDB): |
|
