Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS6A, RPS6B.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-91 | [1..236] | [1..239] |
|
|
5.0E-91 | [1..236] | [1..239] |
|
|
1.0E-90 | [1..236] | [1..239] |
|
|
8.0E-90 | [1..236] | [1..239] |
|
|
1.0E-89 | [1..236] | [1..239] |
|
|
2.0E-89 | [1..236] | [1..239] |
|
|
2.0E-86 | [1..235] | [1..237] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MKLNISYPVN GSQKTFEIDD EHRIRVFFDK RIGQEVDGEA VGDEFKGYVF KISGGNDKQG 60
61 FPMKQGVLLP TRIKLLLTKN VSCYRPRRDG ERKRKSVRGA IVGPDLAVLA LVIVKKGEQE 120
121 LEGLTDTTVP
|
| Detection Method: |  |
| Confidence: | 80.853872 |
| Match: | PF01092 |
| Description: | Ribosomal protein S6e |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [131-236] |
1 11 21 31 41 51
| | | | | |
1 KRLGPKRANN IRKFFGLSKE DDVRDFVIRR EVTKGEKTYT KAPKIQRLVT PQRLQRKRHQ 60
61 RALKVRNAQA QREAAAEYAQ LLAKRLSERK AEKAEIRKRR ASSLKA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.465 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.568 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.428 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.720 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.535 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.513 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.474 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.466 | N/A | N/A | a.7.4 | Smac/diablo |
| View | Download | 0.445 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.435 | N/A | N/A | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.409 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.398 | N/A | N/A | a.7.4 | Smac/diablo |
| View | Download | 0.396 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.396 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.384 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.320 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.318 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.300 | N/A | N/A | a.38.1 | Helix-loop-helix DNA-binding domain |
| View | Download | 0.274 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.271 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.259 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.244 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.236 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.229 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.227 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.215 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
