| Protein: | SMY2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 790 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMY2.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-66 | [41..789] | [1038..1791] |
|
|
7.0E-66 | [29..789] | [991..1791] |
|
|
9.0E-66 | [29..789] | [990..1790] |
|
|
1.0E-65 | [41..787] | [35..786] |
|
|
1.0E-65 | [41..787] | [1038..1789] |
|
Region A: Residues: [1-208] |
1 11 21 31 41 51
| | | | | |
1 MGLLELFTIL QIPTHAVQWS LRVHHFHSYS LSFYLPSSSP IYSTSQPTSI MIAPDSQRLF 60
61 GSFDEQFKDL KLDSVDTENN NTHGVSTILD SSPASVNNNT NGAVAASVNT VPGSTFRSNT 120
121 PLLGGRHPLS RTSSLIDSIG IQRAASPFSS MKEPFIPQSS GVMSSSFWHG DHPESRVSTP 180
181 VQQHPLLQRN ESSSSFSYAA NLGVNLST
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [209-550] |
1 11 21 31 41 51
| | | | | |
1 HSLAVDITPL STPTAAQSHV NLFPSSDIPP NMSMNGMSQL PAPVSVESSW RYIDTQGQIH 60
61 GPFTTQMMSQ WYIGGYFAST LQISRLGSTP ETLGINDIFI TLGELMTKLE KYDTDPFTTF 120
121 DKLHVQTTSS DSINLNLAPY ASGVAATGTI KATENDIFKP LTHDNIWDMD GGTTSKGVDI 180
181 KLASATTISQ TDESHKQEYK STTMLEKGKK EKSESVAKAL LDEQEKRNRE LKRKEEARLS 240
241 KKQKQKEDDL LKKQKEQKEQ KEKEALEAEK QKKSEKTKKD TQTQTEGFKT SKDLPSLNSS 300
301 SANPAPWASK VKVNNAIETS IKNGVSSTGK KKGEPLGLQQ RN
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [551-790] |
1 11 21 31 41 51
| | | | | |
1 SKEEKQKEEL KSVLNWANKS SLPSNQTIDI KSQFQKSPKG MKESSPLKEL EDPNFIEEQK 60
61 KLWEKVQSSS KQVKSTSSAS TTTSSWTTVT SKGKAPIGTV VSPYSKTNTS LNSSLTAKTS 120
121 TTSTTTTFAS MNNVSPRQEF IKWCKSQMKL NSGITNNNVL ELLLSLPTGP ESKELIQETI 180
181 YANSDVMDGR RFATEFIKRR VACEKQGDDP LSWNEALALS GNDDDGWEFQ VVSKKKGRKH 240
241
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
