| Protein: | RTC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 296 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RTC2.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..11] | [285..31] |
|
|
302.0 | [0..1] | [288..1] |
|
|
281.0 | [0..1] | [288..2] |
|
|
263.0 | [0..1] | [286..1] |
|
|
262.0 | [0..3] | [284..1] |
|
|
242.0 | [0..11] | [285..39] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MKLIPIILNA KNLSGMAGSI SICCWIVVFV PQIYENFRRQ SAEGLSLLFI VLWLLGDIFN 60
61 VMGAMMQNLL PTMIILAAYY TLADLILLIQ CMWYDKEKKS ILQEVKKNVD PVHLPPANPI 120
121 NETVLQDVFN EYEPLLPRIE EE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.943 | N/A | N/A | a.24.18 | Description not found. |
| View | Download | 0.920 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.883 | N/A | N/A | a.29.16 | Description not found. |
| View | Download | 0.866 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.866 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.858 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.845 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.811 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.794 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.786 | N/A | N/A | a.46.1 | Methionine synthase domain |
|
Region A: Residues: [143-296] |
1 11 21 31 41 51
| | | | | |
1 DSQSYSSLEL GRTIVVKERE NFFNDFLIVS GVLIAGILSW YISYCSGLDN GIPKKKPAFE 60
61 QINLPAQILG YLSAILYLGS RIPQIVLNFK RKSCEGVSFL FFLFACLGNT SFIISVLSAS 120
121 WLIGSAGTLL MDFTVFIQFF LYAKPKYEKI LIDN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
