| Protein: | CKS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 150 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CKS1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-49 | [1..150] | [1..150] |
|
|
1.0E-35 | [11..107] | [7..103] |
|
|
2.0E-35 | [11..107] | [8..104] |
|
|
1.0E-32 | [11..111] | [11..111] |
|
|
2.0E-30 | [26..129] | [2..98] |
|
|
1.0E-27 | [21..104] | [24..98] |
|
|
2.0E-27 | [27..115] | [3..82] |
|
Region A: Residues: [1-150] |
1 11 21 31 41 51
| | | | | |
1 MYHHYHAFQG RKLTDQERAR VLEFQDSIHY SPRYSDDNYE YRHVMLPKAM LKVIPSDYFN 60
61 SEVGTLRILT EDEWRGLGIT QSLGWEHYEC HAPEPHILLF KRPLNYEAEL RAATAAAQQQ 120
121 QQQQQQQQQQ QQQHQTQSIS NDMQVPPQIS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.313 | 0.721 | protein kinase activator activity | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.325 | 0.018 | protein kinase activator activity | d.110.4 | SNARE-like |
| View | Download | 0.233 | 0.010 | protein kinase activator activity | d.110.2 | GAF domain-like |
| View | Download | 0.292 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.243 | N/A | N/A | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.207 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.203 | N/A | N/A | d.110.2 | GAF domain-like |
| Term | Confidence | Notes |
| cyclin-dependent protein kinase regulator activity | 3.97841828100668 | bayes_pls_golite062009 |
| binding | 2.18113207610794 | bayes_pls_golite062009 |
| protein binding | 1.97943309243131 | bayes_pls_golite062009 |
| protein kinase regulator activity | 1.37860707665544 | bayes_pls_golite062009 |
| kinase regulator activity | 1.32978090173102 | bayes_pls_golite062009 |
| protein kinase binding | 0.944579171364175 | bayes_pls_golite062009 |
| kinase binding | 0.867010292327918 | bayes_pls_golite062009 |
| enzyme binding | 0.54410658997703 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.334428481657021 | bayes_pls_golite062009 |
| small conjugating protein binding | 0.32298430897304 | bayes_pls_golite062009 |
| ubiquitin binding | 0.2354005843111 | bayes_pls_golite062009 |
