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View Structure Prediction Details

Protein: YBR134W
Organism: Saccharomyces cerevisiae
Length: 133 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR134W.

Description E-value Query
Range
Subject
Range
gi|1870110 - gi|1870110|emb|CAA85093.1| unnamed protein product [Saccharomyces cerevisiae]
95.0 [0..90] [133..1]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKAWFDTNK YVAMHMQTEP FVYIKIICIK EEERPHNSTH THTHTLSHTQ FEIAPIGLGN  60
   61 RITSHSKYTI FSITHTHCIK PFVSKKYKNT AQRAVSGSIC DCLFFFWFSS VQNEGSKNFQ 120
  121 IKQYSSPEIC FRV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.461 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.456 b.61.5 Dipeptidyl peptidase I (cathepsin C), exclusion domain
View Download 0.445 b.61.5 Dipeptidyl peptidase I (cathepsin C), exclusion domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle