| Protein: | YSA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 231 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YSA1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-48 | [1..231] | [1..231] |
|
|
3.0E-32 | [13..225] | [2..206] |
|
|
5.0E-32 | [35..225] | [17..207] |
|
|
3.0E-31 | [31..226] | [3..175] |
|
|
1.0E-29 | [31..224] | [4..177] |
|
|
2.0E-29 | [30..223] | [2..173] |
|
|
7.0E-29 | [30..224] | [2..174] |
|
|
1.0E-28 | [27..228] | [1..202] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MFLRNVRVIS LNSRRLFRTM STVKGKPEDA KIIEARHVKE TSDCKWIGLQ KIIYKDPNGK 60
61 EREWDSAVRT TR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.849 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.823 | d.17.1 | Cystatin/monellin |
| View | Download | 0.891 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.890 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.821 | b.1.1 | Immunoglobulin |
| View | Download | 0.819 | b.1.1 | Immunoglobulin |
| View | Download | 0.800 | b.1.1 | Immunoglobulin |
| View | Download | 0.796 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.765 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.758 | b.1.2 | Fibronectin type III |
| View | Download | 0.755 | d.230.2 | Flavin-binding protein dodecin |
| View | Download | 0.754 | d.230.2 | Flavin-binding protein dodecin |
| View | Download | 0.739 | b.1.3 | PKD domain |
| View | Download | 0.715 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.714 | b.1.3 | PKD domain |
| View | Download | 0.710 | b.1.1 | Immunoglobulin |
| View | Download | 0.684 | d.17.5 | Uracil-DNA glycosylase inhibitor protein |
| View | Download | 0.669 | b.1.1 | Immunoglobulin |
| View | Download | 0.665 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.655 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.654 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.650 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.649 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.647 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.647 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.644 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.642 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.640 | d.17.1 | Cystatin/monellin |
| View | Download | 0.632 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.630 | b.1.2 | Fibronectin type III |
| View | Download | 0.628 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.627 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.625 | b.1.1 | Immunoglobulin |
| View | Download | 0.614 | b.1.1 | Immunoglobulin |
| View | Download | 0.610 | d.230.2 | Flavin-binding protein dodecin |
| View | Download | 0.609 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.599 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.598 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.592 | d.17.1 | Cystatin/monellin |
| View | Download | 0.582 | b.1.1 | Immunoglobulin |
| View | Download | 0.571 | d.17.1 | Cystatin/monellin |
| View | Download | 0.569 | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.568 | d.17.1 | Cystatin/monellin |
| View | Download | 0.568 | b.1.1 | Immunoglobulin |
| View | Download | 0.552 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.550 | b.1.18 | E set domains |
| View | Download | 0.549 | b.1.2 | Fibronectin type III |
| View | Download | 0.547 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.547 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.541 | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.537 | d.17.4 | NTF2-like |
| View | Download | 0.537 | d.17.1 | Cystatin/monellin |
| View | Download | 0.536 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.534 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.527 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.525 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.524 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.522 | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.516 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.511 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.509 | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.505 | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.504 | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.502 | b.1.1 | Immunoglobulin |
| View | Download | 0.484 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.483 | d.29.1 | Ribosomal protein L31e |
| View | Download | 0.466 | d.17.1 | Cystatin/monellin |
| View | Download | 0.464 | b.1.1 | Immunoglobulin |
| View | Download | 0.460 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.456 | b.105.1 | Penicillin-binding protein 5, C-terminal domain |
| View | Download | 0.451 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.446 | b.1.2 | Fibronectin type III |
| View | Download | 0.440 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.439 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.435 | b.1.18 | E set domains |
| View | Download | 0.433 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.430 | d.200.1 | Integrin beta tail domain |
| View | Download | 0.428 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.422 | b.34.4 | Electron transport accessory proteins |
| View | Download | 0.418 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.418 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.414 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.414 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.410 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.410 | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.403 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.402 | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.389 | b.36.1 | PDZ domain-like |
| View | Download | 0.378 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.377 | d.17.1 | Cystatin/monellin |
| View | Download | 0.375 | d.17.1 | Cystatin/monellin |
| View | Download | 0.372 | b.1.3 | PKD domain |
| View | Download | 0.369 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.369 | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.369 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.363 | b.1.3 | PKD domain |
| View | Download | 0.361 | b.1.2 | Fibronectin type III |
| View | Download | 0.353 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.351 | b.7.3 | PHL pollen allergen |
| View | Download | 0.350 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.337 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.336 | b.36.1 | PDZ domain-like |
| View | Download | 0.332 | b.1.2 | Fibronectin type III |
| View | Download | 0.326 | d.99.1 | Ribosomal protein L9 C-domain |
| View | Download | 0.323 | b.1.1 | Immunoglobulin |
| View | Download | 0.322 | d.99.1 | Ribosomal protein L9 C-domain |
| View | Download | 0.316 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.316 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.313 | d.93.1 | SH2 domain |
| View | Download | 0.312 | b.1.2 | Fibronectin type III |
| View | Download | 0.311 | b.34.7 | DNA-binding domain of retroviral integrase |
| View | Download | 0.309 | d.17.1 | Cystatin/monellin |
| View | Download | 0.306 | b.1.3 | PKD domain |
| View | Download | 0.305 | d.93.1 | SH2 domain |
| View | Download | 0.305 | b.7.3 | PHL pollen allergen |
| View | Download | 0.301 | b.1.1 | Immunoglobulin |
| View | Download | 0.300 | d.58.12 | eEF-1beta-like |
| View | Download | 0.297 | b.1.1 | Immunoglobulin |
| View | Download | 0.295 | b.7.3 | PHL pollen allergen |
| View | Download | 0.291 | b.1.18 | E set domains |
| View | Download | 0.287 | b.7.3 | PHL pollen allergen |
| View | Download | 0.286 | b.1.2 | Fibronectin type III |
| View | Download | 0.281 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.281 | b.1.2 | Fibronectin type III |
| View | Download | 0.277 | b.1.2 | Fibronectin type III |
| View | Download | 0.276 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.275 | d.17.1 | Cystatin/monellin |
| View | Download | 0.273 | d.58.5 | GlnB-like |
| View | Download | 0.273 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.272 | b.36.1 | PDZ domain-like |
| View | Download | 0.271 | d.58.12 | eEF-1beta-like |
| View | Download | 0.271 | d.17.1 | Cystatin/monellin |
| View | Download | 0.268 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.266 | b.7.3 | PHL pollen allergen |
| View | Download | 0.265 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.263 | d.53.1 | Ribosomal protein S3 C-terminal domain |
| View | Download | 0.263 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.261 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.260 | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.259 | d.12.1 | Ribosomal proteins L23 and L15e |
| View | Download | 0.257 | d.99.1 | Ribosomal protein L9 C-domain |
| View | Download | 0.256 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.254 | b.1.1 | Immunoglobulin |
| View | Download | 0.250 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.248 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.247 | b.1.6 | Cadherin |
| View | Download | 0.245 | d.93.1 | SH2 domain |
| View | Download | 0.244 | b.1.2 | Fibronectin type III |
| View | Download | 0.243 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.243 | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.242 | d.17.1 | Cystatin/monellin |
| View | Download | 0.237 | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.233 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.232 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.230 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.221 | b.36.1 | PDZ domain-like |
| View | Download | 0.217 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.217 | d.17.1 | Cystatin/monellin |
| View | Download | 0.216 | b.50.1 | Acid proteases |
| View | Download | 0.212 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.212 | d.99.1 | Ribosomal protein L9 C-domain |
| View | Download | 0.209 | d.17.4 | NTF2-like |
| View | Download | 0.208 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.205 | d.12.1 | Ribosomal proteins L23 and L15e |
| View | Download | 0.204 | b.61.5 | Dipeptidyl peptidase I (cathepsin C), exclusion domain |
| View | Download | 0.204 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.201 | d.74.3 | RBP11-like subunits of RNA polymerase |
|
Region A: Residues: [73-231] |
1 11 21 31 41 51
| | | | | |
1 SSGGVDGIGI LTILKYKDGK PDEILLQKQF RPPVEGVCIE MPAGLIDAGE DIDTAALREL 60
61 KEETGYSGKI ISKSPTVFND PGFTNTNLCL VTVEVDMSLP ENQKPVTQLE DNEFIECFSV 120
121 ELHKFPDEMV KLDQQGYKLD ARVQNVAQGI LMAKQYHIK
|
| Detection Method: | |
| Confidence: | 47.40824 |
| Match: | 1f3yA_ |
| Description: | Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) |
Matching Structure (courtesy of the PDB): |
|
