| Protein: | IST2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 946 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IST2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..915] | [1..915] |
|
|
0.0 | [30..547] | [282..847] |
|
|
0.0 | [35..554] | [318..888] |
|
|
0.0 | [73..615] | [137..668] |
|
|
9.0E-97 | [51..626] | [200..785] |
|
|
8.0E-82 | [190..635] | [194..568] |
|
Region A: Residues: [1-548] |
1 11 21 31 41 51
| | | | | |
1 MSQTITSLDP NCVIVFNKTS SANEKSLNVE FKRLNIHSII EPGHDLQTSY AFIRIHQDNA 60
61 KPLFSFLQNL DFIESIIPYH DTELSDDLHK LISISKSKIL EAPKQYELYN LSNLTNNPKQ 120
121 SLYFAFLQNY IKWLIPFSFF GLSIRFLSNF TYEFNSTYSL FAILWTLSFT AFWLYKYEPF 180
181 WSDRLSKYSS FSTIEFLQDK QKAQKKASSV IMLKKCCFIP VALLFGAILL SFQLYCFALE 240
241 IFYKQIYNGP MISILSFLPT ILICTFTPVL TVIYNKYFVE PMTKWENHSS VVNAKKSKEA 300
301 KNFVIIFLSS YVPLLITLFL YLPMGHLLTA EIRTKVFNAF SILARLPTHD SDFIIDTKRY 360
361 EDQFFYFIVI NQLIQFSMEN FVPSLVSIAQ QKINGPNPNF VKAESEIGKA QLSSSDMKIW 420
421 SKVKSYQTDP WGATFDLDAN FKKLLLQFGY LVMFSTIWPL APFICLIVNL IVYQVDLRKA 480
481 VLYSKPEYFP FPIYDKPSSV SNTQKLTVGL WNSVLVMFSI LGCVITATLT YMYQSCNIPG 540
541 VGAHTSIH
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [549-946] |
1 11 21 31 41 51
| | | | | |
1 TNKAWYLANP INHSWINIVL YAVFIEHVSV AIFFLFSSIL KSSHDDVANG IVPKHVVNVQ 60
61 NPPKQEVFEK IPSPEFNSNN EKELVQRKGS ANEKLHQELG EKQPASSANG YEAHAATHAN 120
121 NDPSSLSSAS SPSLSSSSSS SKTGVVKAVD NDTAGSAGKK PLATESTEKR NSLVKVPTVG 180
181 SYGVAGATLP ETIPTSKNYY LRFDEDGKSI RDAKSSAESS NATNNNTLGT ESKLLPDGDA 240
241 VDALSRKIDQ IPKIAVTGGE NNENTQAKDD AATKTPLIKD ANIKPVVNAA VNDNQSKVSV 300
301 ATEQTKKTEV STKNGPSRSI STKETKDSAR PSNNNTTTTT TTDATQPHHH HHHHRHRDAG 360
361 VKNVTNNSKT TESSSSSSAA KEKPKHKKGL LHKLKKKL
|
| Detection Method: | |
| Confidence: | 9.88 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
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