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View Structure Prediction Details

Protein: ECM8
Organism: Saccharomyces cerevisiae
Length: 339 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM8.

Description E-value Query
Range
Subject
Range
ECM8 - Non-essential protein of unknown function
0.0 [1..339] [1..339]

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Predicted Domain #1
Region A:
Residues: [1-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPIIVDHSK EKPSRTKYSH KGKYCNDSEN FDFGKANTDC KHVFKSISKQ LIFLPRCFQH  60
   61 HSIRGWMKDR YSEFGYKIKR NQNCPPSACV QALYNTSRSN TEESNPNSLD SLIMYKYMRY 120
  121 SEKKKELMCR FCQGNNWILA ENYLKHLFFA HGILSEFKPH TLYHFESKLL KIQGKLNFKI 180
  181 QVLKEPEFSK KILNSLTVSI IPSPLAYYTQ TLNGGFRRIH VKCPHCENWI RLGWCEYDEI 240
  241 IRDSFQDFES LRNLNADYNG MSYIQTRNRE DIEGIYENYF THYIQCDLAT FRTKCLYVQV 300
  301 ITKAIDCVRK ILKINDHITN QTKFAASNEL NDYETADKY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle