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View Structure Prediction Details

Protein: HSP26
Organism: Saccharomyces cerevisiae
Length: 214 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HSP26.

Description E-value Query
Range
Subject
Range
gi|295614 - gi|295614|gb|AAA79010.1| heat shock protein 26 [Saccharomyces cerevisiae]
1.0E-53 [1..214] [1..214]
gi|8671873 - gi|8671873|gb|AAF78436.1|AC018748_15 Contains similarity to 17.6 KD class I heat shock protein from ...
3.0E-41 [58..208] [257..403]
HSP13_SOYBN - 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1
2.0E-38 [58..208] [11..153]
gi|447739 - gi|447739|prf||1915304A nylB upstream ORF
3.0E-37 [58..208] [11..154]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFNSPFFDF FDNINNEVDA FNRLLGEGGL RGYAPRRQLA NTPAKDSTGK EVARPNNYAG  60
   61 ALYDPRDETL DDWFDNDLSL FPSGFGFPRS VAVPVDILDH DNNYELKVVV PGVKSKKDID 120
  121 IEYHQNKNQI LVSGEIPSTL NEESKDKVKV KESSSGKFKR VITLPDYPGV DADNIKADYA 180
  181 NGVLTLTVPK LKPQKDGKNH VKKIEVSSQE SWGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.751666
Match: 1gmeA_
Description: Small heat shock protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.38311294671926 bayes_pls_golite062009
unfolded protein binding 0.540503020005284 bayes_pls_golite062009
protein binding 0.490902112311059 bayes_pls_golite062009
catalytic activity 0.260308151913118 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle