YRC Public Data Repository - Protein Structure Prediction

Protein:	ALG14
Organism:	Saccharomyces cerevisiae
Length:	237 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG14.

Description	E-value	Query Range	Subject Range
ALG14_YEAST - UDP-N-acetylglucosamine transferase subunit ALG14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... ALG14 - Component of UDP-GlcNAc transferase required for the second step of dolichyl-linked oligosaccharide ...	4.0E-74	[1..237]	[1..237]
gi\|163644898 - gi\|163644898\|gb\|ABY28338.1\| yeast codon-optimized human ALG14 [synthetic construct] ALG14 - asparagine-linked glycosylation 14 homolog (S. cerevisiae)	2.0E-53	[42..237]	[24..216]
gi\|220952386 - gi\|220952386\|gb\|ACL88736.1\| CG6308-PA [synthetic construct] CG6308-PA - This gene is referred to in FlyBase by the symbol Dmel\CG6308 (CG6308, FBgn0030645). It is a protein...	2.0E-52	[50..237]	[2..191]
ALG14_MOUSE - UDP-N-acetylglucosamine transferase subunit ALG14 homolog OS=Mus musculus GN=Alg14 PE=1 SV=1	4.0E-49	[43..237]	[25..217]
ALG14_SCHPO - UDP-N-acetylglucosamine transferase subunit alg14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... SPAC5D6.06c - UDP-GlcNAc transferase associated protein Alg14	5.0E-48	[42..236]	[20..209]
gi\|7494176 - pir\|\|F71612 glycosyl transferase (novel euk. family) PFB0515w - malaria parasite (Plasmodium falcipa... gi\|3845205, gi\|1... - gi\|3845205\|gb\|AAC71892.1\| Dolichol-linked oligosaccharide biosynthesis enzyme, putative [Plasmodium ...	3.0E-40	[9..222]	[6..195]
gi\|55737102 - gb\|AAV60744.1\| exopolysaccharide biosynthesis protein, glycosyltransferase [Streptococcus thermophil... gi\|18076396 - gi\|18076396\|emb\|CAC82008.1\| Eps2 proetin [Streptococcus thermophilus] gi\|55821117, gi\|... - gi\|55821117\|ref\|YP_139559.1\| exopolysaccharide biosynthesis protein, glycosyltransferase [Streptococ...	3.0E-40	[56..236]	[2..148]
gi\|18033404, gi\|... - gi\|32364315\|gb\|AAP80264.1\| CpsF [Streptococcus agalactiae], gi\|18033404\|gb\|AAL57130.1\|AF332907_3 Cps...	8.0E-39	[56..236]	[2..148]
gi\|1314567 - gi\|1314567\|gb\|AAC44060.1\| glycosyl transferase [Sphingomonas sp. S88]	1.0E-38	[51..228]	[15..168]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	1.0E-38	[56..236]	[2..148]

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Predicted Domain #1

Region A:
Residues: [1-237]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTAYLASLV LIVSTAYVIR LIAILPFFHT QAGTEKDTKD GVNLLKIRKS SKKPLKIFVF  60
   61 LGSGGHTGEM IRLLENYQDL LLGKSIVYLG YSDEASRQRF AHFIKKFGHC KVKYYEFMKA 120
  121 REVKATLLQS VKTIIGTLVQ SFVHVVRIRF AMCGSPHLFL LNGPGTCCII SFWLKIMELL 180
  181 LPLLGSSHIV YVESLARINT PSLTGKILYW VVDEFIVQWQ ELRDNYLPRS KWFGILV

[Run NCBI BLAST on this sequence.]

Detection Method:	ORFEUS
Confidence:	8.21
Match:	1f0kA
Description:	Peptidoglycan biosynthesys glycosyltransferase MurG
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits