| Protein: | TAT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 619 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..619] | [1..619] |
|
|
0.0 | [23..618] | [14..608] |
|
|
0.0 | [3..619] | [5..583] |
|
|
0.0 | [38..619] | [6..582] |
|
Region A: Residues: [1-55] |
1 11 21 31 41 51
| | | | | |
1 MDDSVSFIAK EASPAQYSHS LHERTHSEKQ KRDFTITEKQ DEVSGQTAEP RRTDS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.560 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.648 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.320 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.318 | a.17.1 | p8-MTCP1 |
| View | Download | 0.344 | d.37.1 | CBS-domain |
| View | Download | 0.235 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.209 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.206 | g.58.1 | Pheromone ER-23 |
|
Region A: Residues: [56-619] |
1 11 21 31 41 51
| | | | | |
1 KSILQRKCKE FFDSFKRQLP PDRNSELESQ EKNNLTKSIK SRHLVMISLG TGIGTGLLVG 60
61 NGQVLGTAGP AGLVLGYGIA SIMLYCIIQA AGELGLCYAG LTGNYTRYPS ILVDPSLGFA 120
121 VSVVYTIQWL TVLPLQLVTA AMTVKYWTSV NADIFVAVVF VFVIIINLFG SRGYAEAEFI 180
181 FNSCKILMVI GFVILAIIIN CGGAGDRRYI GAEYWHNPGP FAHGFKGVCT VFCYAAFSYG 240
241 GIEVLLLSAA EQENPTKSIP NACKKVVYRI LLIYMLTTIL VCFLVPYNSD ELLGSSDSSG 300
301 SHASPFVIAV ASHGVKVVPH FINAVILISV ISVANSSLYS GPRLLLSLAE QGVLPKCLAY 360
361 VDRNGRPLLC FFVSLVFGCI GFVATSDAEE QVFTWLLAIS SLSQLFIWMS MSLSHIRFRD 420
421 AMAKQGRSMN EVGYKAQTGY WGSWLAVLIA IFFLVCQFWV AIAPVNEHGK LNVKVFFQNY 480
481 LAMPIVLFAY FGHKIYFKSW SFWIPAEKID LDSHRNIFVS PSLTEIDKVD DNDDLKEYEN 540
541 SESSENPNSS RSRKFFKRMT NFWC
|
| Detection Method: | |
| Confidence: | 193.69897 |
| Match: | PF00324 |
| Description: | Amino acid permease |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
