YRC Public Data Repository - Protein Structure Prediction

Protein:	TSC3
Organism:	Saccharomyces cerevisiae
Length:	80 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TSC3.

Description	E-value	Query Range	Subject Range
TSC3_ASHGO - Serine palmitoyltransferase-regulating protein TSC3 OS=Ashbya gossypii GN=TSC3 PE=3 SV=1 TSC3_ASHGO - Serine palmitoyltransferase-regulating protein TSC3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109....	71.0	[0..3]	[77..19]
TSC3_KLULA - Serine palmitoyltransferase-regulating protein TSC3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS ... TSC3_KLULA - Serine palmitoyltransferase-regulating protein TSC3 OS=Kluyveromyces lactis GN=TSC3 PE=3 SV=1	70.0	[0..3]	[80..12]

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Predicted Domain #1

Region A:
Residues: [1-80]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQHKSSMVY IPTTKEAKRR NGKSEGILNT IEEVVEKLYW TYYIHLPFYL MASFDSFFLH  60
   61 VFFLTIFSLS FFGILKYCFL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits