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View Structure Prediction Details

Protein: MUM2
Organism: Saccharomyces cerevisiae
Length: 366 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MUM2.

Description E-value Query
Range
Subject
Range
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
3.0E-47 [4..366] [1346..1706]
gi|45383668, gi|... - gi|9800486|gb|AAF99314.1|AF272033_1 fast myosin heavy chain isoform 2 [Gallus gallus], gi|45383668|r...
9.0E-47 [10..366] [1365..1719]
gi|4249695 - gi|4249695|gb|AAD13769.1| myosin heavy chain [Rana catesbeiana]
2.0E-46 [6..366] [293..651]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYMAYDYDP QHSLETSFNN LAFHPHQQSQ QQALYESGER NDARPGLMNT LGQASKMNNS  60
   61 MLPQGSSASP LTGQHSLNST TNFN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 2.522879
Match: 1c1gA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [85-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPSMNTYNY QNVPQASMRN TLNHNNIMNG ATANDYWLDP MNNMTNNKDT NGNPNDSMSS  60
   61 MSNMTAKTSI NSTAFKNSFV PFNHVTALSM NNVNSNEMNS NKDDRMEALE VELQIKESQI 120
  121 ESLENEIQRL KKIFNEGLNY KQNEHKYEKE NCHIPQTFEL PASLEVIFRK LSSSLHAKEK 180
  181 ELAETKENLE SILTALALNP TNSVTKYGRY DAESIAHKMV VRLENLTNEN KEMAKMLAYG 240
  241 RSKETQIELQ LAKKENLELR EKIASLEAHL ASKESSKEDV AN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.045757
Match: 1i84S_
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle