Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR056W.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..501] | [1..501] |
|
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2.0E-81 | [35..490] | [3..444] |
|
|
4.0E-71 | [13..413] | [9..424] |
|
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5.0E-71 | [36..413] | [43..434] |
|
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6.0E-71 | [36..413] | [43..434] |
|
|
2.0E-70 | [12..413] | [6..425] |
|
|
3.0E-69 | [12..413] | [6..422] |
|
Region A: Residues: [1-296] |
1 11 21 31 41 51
| | | | | |
1 MIGSLRNKFE HFKVSEKGGQ NLSTTLPKLP PAKDLDRSTI YKYRYNYGVN LGALFVLEPW 60
61 IFSKETICTI DGKEYDSEFD AISQQLKKHS SEDVAKMLSD HYKKYIDRID WEWLSKDAHI 120
121 TALRIPIGYW HVEDGKHLDS LPFAPLRKVY ELAKPWEKLG ELINNAKKMS IGVLIDLHGL 180
181 PGGANCDSHS GSKSGEAAFF HKEKYMTKVY KDILPAIINT MTLGNENIIG IQVVNEACFD 240
241 NNPKGQKFYY SEAINTVEKL QPGLPVIISD GWWPQQWADW VKEKHFSEIV VIDSHV
|
|
Region B: Residues: [319-334] |
1 11 21 31 41 51
| | | | | |
1 TVNFPHEDAD YTVGEF
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|
Region C: Residues: [364-380] |
1 11 21 31 41 51
| | | | | |
1 VFSHVASWGW FFWTLQF
|
| Detection Method: |  |
| Confidence: | 196.68867 |
| Match: | 1cz1A_ |
| Description: | Exo-beta-(1,3)-glucanase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [297-318] |
1 11 21 31 41 51
| | | | | |
1 YRCFSDSDKS KDANSIIKDL PN
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|
Region B: Residues: [335-363] |
1 11 21 31 41 51
| | | | | |
1 SGVLDGQTWN KTSGDRDAIV QKYVQTQAD
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|
Region C: Residues: [381-421] |
1 11 21 31 41 51
| | | | | |
1 EYGDGGEWGL APMMQKGNLP KRPHGDDLQV DKKKIDSIIH E
|
| Detection Method: | |
| Confidence: | 196.68867 |
| Match: | 1cz1A_ |
| Description: | Exo-beta-(1,3)-glucanase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [422-501] |
1 11 21 31 41 51
| | | | | |
1 HEAYWNGKGK NFEHWRFEDG IKTAVDDIIA FRKFDNSLIG RWHSWKSQRR AEYVSAKKDS 60
61 EFMWEWDQGY QRGLDEFNKY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.626 | a.130.1 | Chorismate mutase II |
| View | Download | 0.661 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.706 | a.46.1 | Methionine synthase domain |
| View | Download | 0.591 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.578 | a.130.1 | Chorismate mutase II |
| View | Download | 0.562 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.552 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.541 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.526 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.513 | a.4.1 | Homeodomain-like |
| View | Download | 0.443 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.441 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.426 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.422 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.404 | a.130.1 | Chorismate mutase II |
| View | Download | 0.399 | a.64.1 | Saposin |
| View | Download | 0.398 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.383 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.367 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.362 | a.46.1 | Methionine synthase domain |
| View | Download | 0.350 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.345 | a.46.1 | Methionine synthase domain |
| View | Download | 0.342 | a.112.1 | Description not found. |
| View | Download | 0.335 | g.53.1 | TAZ domain |
| View | Download | 0.326 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.316 | a.24.4 | Hemerythrin |
| View | Download | 0.315 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.313 | a.118.8 | TPR-like |
| View | Download | 0.309 | a.17.1 | p8-MTCP1 |
| View | Download | 0.308 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.305 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.304 | a.130.1 | Chorismate mutase II |
| View | Download | 0.302 | a.24.4 | Hemerythrin |
| View | Download | 0.301 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.284 | a.74.1 | Cyclin-like |
| View | Download | 0.276 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.275 | a.24.4 | Hemerythrin |
| View | Download | 0.265 | a.46.1 | Methionine synthase domain |
| View | Download | 0.263 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.259 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.253 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.251 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.245 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.245 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.242 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.241 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.241 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.239 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.235 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.232 | a.24.4 | Hemerythrin |
| View | Download | 0.231 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.222 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.219 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.216 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.213 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.212 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.201 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
