YRC Public Data Repository - Protein Structure Prediction

Protein:	CST26
Organism:	Saccharomyces cerevisiae
Length:	397 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CST26.

Description	E-value	Query Range	Subject Range
CST26_YEAST - Uncharacterized acyltransferase CST26 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CS... CST26 - Protein required for incorporation of stearic acid into phosphatidylinositol; affects chromosome sta...	2.0E-85	[1..397]	[1..397]
LPAT2_ARATH - 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=LPAT2 PE=1 SV=2	2.0E-72	[14..393]	[7..330]
LPAT2_BRANA - 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica napus GN=LPAT2 PE=2 SV=1	8.0E-72	[14..393]	[7..330]
PLCD_RAT - 1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Rattus norvegicus GN=Agpat4 PE=2 SV=1	6.0E-65	[9..386]	[8..326]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	2.0E-63	[16..393]	[10..331]
AGPAT4 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	1.0E-61	[9..386]	[8..326]
CG4729-PB, CG472... - This gene is referred to in FlyBase by the symbol Dmel\CG4729 (CG4729, FBgn0036623). It is a protein... gi\|220958652 - gi\|220958652\|gb\|ACL91869.1\| CG4729-PA [synthetic construct]	2.0E-59	[9..397]	[8..335]

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Predicted Domain #1

Region A:
Residues: [1-397]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHQKIAHKV RKVVVPGISL LIFFQGCLIL LFLQLTYKTL YCRNDIRKQI GLNKTKRLFI  60
   61 VLVSSILHVV APSAVRITTE NSSVPKGTFF LDLKKKRILS HLKSNSVAIC NHQIYTDWIF 120
  121 LWWLAYTSNL GANVFIILKK SLASIPILGF GMRNYNFIFM SRKWAQDKIT LSNSLAGLDS 180
  181 NARGAGSLAG KSPERITEEG ESIWNPEVID PKQIHWPYNL ILFPEGTNLS ADTRQKSAKY 240
  241 AAKIGKKPFK NVLLPHSTGL RYSLQKLKPS IESLYDITIG YSGVKQEEYG ELIYGLKSIF 300
  301 LEGKYPKLVD IHIRAFDVKD IPLEDENEFS EWLYKIWSEK DALMERYYST GSFVSDPETN 360
  361 HSVTDSFKIN RIELTEVLIL PTLTIIWLVY KLYCFIF

[Run NCBI BLAST on this sequence.]

Detection Method:	ORFEUS
Confidence:	7.59
Match:	1k30A
Description:	Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits