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View Structure Prediction Details

Protein: CSG2
Organism: Saccharomyces cerevisiae
Length: 410 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSG2.

Description E-value Query
Range
Subject
Range
gi|461845, gi|399655 - gi|461845|sp|P35206.1|CSG2_YEAST RecName: Full=Mannosyl phosphorylinositol ceramide synthase regulat...
0.0 [1..410] [1..410]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTLLWFSS VIGYVIQTKC LSNIQSKKEI SVGPNGTIAT PETNGDNGNS SSLTFYLTFM  60
   61 YFASWLLLVP ASRLWEKMRP MFVSDSDSNR NSQFDN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNSGSVTNED VDTFSHVLDD PQPRIPAQQQ KQKIISVATF KYVAKLTVLA LIMIVADLTY  60
   61 NMALSLSPAF DVALMQNTAI FEIVTLLYGV CGISRKNYVF RNFLIMMNAV IGILIISYTK 120
  121 ATCDMLAGKL SVNPNTGELS DPFLFDRLKG ALICGLGALI MGPFAVLWNR WFCSNISKNE 180
  181 NSAVVLVKQS THMALIGIIG MVILLPFIPK FPSRESVESI SLFYNDKSFW FSLLGSIIFG 240
  241 SLPSLISILE LNRKAPAEYL TTCNLGAIIF MGLAEWVCEP TQTTIVRWEV IGYIMLTVSL 300
  301 LVLSVTLGEG KYHH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [271-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NISKNENSAV VLVKQSTHMA LIGIIGMVIL LPFIPKFPSR ESVESISLFY NDKSFWFSLL  60
   61 GSIIFGSLPS LISILELNRK APAEYLTTCN LGAIIFMGLA EWVCEPTQTT IVRWEVIGYI 120
  121 MLTVSLLVLS VTLGEGKYHH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle