Protein: | CHS3 |
Organism: | Saccharomyces cerevisiae |
Length: | 1165 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHS3.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1165] | [1..1165] |
|
0.0 | [13..1151] | [60..1184] |
|
0.0 | [70..1162] | [1..1081] |
|
0.0 | [5..1150] | [50..1183] |
|
0.0 | [10..1150] | [48..1184] |
|
0.0 | [21..1150] | [61..1181] |
|
0.0 | [11..1143] | [6..1153] |
Region A: Residues: [1-72] |
1 11 21 31 41 51 | | | | | | 1 MTGLNGDDPD DYYLNLNQDE ESLLRSRHSV GSGAPHRQGS LVRPERSRLN NPDNPHFYYA 60 61 QKTQEQMNHL DV |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.280 | a.4.1 | Homeodomain-like |
View | Download | 0.219 | a.61.1 | Retroviral matrix proteins |
View | Download | 0.223 | a.64.1 | Saposin |
View | Download | 0.222 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
View | Download | 0.307 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.307 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.280 | a.4.1 | Homeodomain-like |
View | Download | 0.223 | a.64.1 | Saposin |
View | Download | 0.222 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
View | Download | 0.219 | a.61.1 | Retroviral matrix proteins |
View | Download | 0.203 | a.39.4 | Hypothetical protein MTH865 |
View | Download | 0.202 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
View | Download | 0.202 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
View | Download | 0.201 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
View | Download | 0.200 | a.112.1 | Description not found. |
Region A: Residues: [73-543] |
1 11 21 31 41 51 | | | | | | 1 LPSSTGVNPN ATRRSGSLRS KGSVRSKFSG RETDSYLLQD MNTTDKKASV KISDEGVAED 60 61 EFDKDGDVDN FEESSTQPIN KSIKPLRKET NDTLSFWQMY CYFITFWAPA PILAFCGMPK 120 121 KERQMAWREK VALISVILYI GAIVAFLTFG FTKTVCSSSK LRLKNNEVST EFVVINGKAY 180 181 ELDTSSRSGI QDVEVDSDTL YGPWSDAGKD ASFLFQNVNG NCHNLITPKS NSSIPHDDDN 240 241 NLAWYFPCKL KNQDGSSKPN FTVENYAGWN CHTSKEDRDA FYGLKSKADV YFTWDGIKNS 300 301 SRNLIVYNGD VLDLDLLDWL EKDDVDYPVV FDDLKTSNLQ GYDLSLVLSN GHERKIARCL 360 361 SEIIKVGEVD SKTVGCIASD VVLYVSLVFI LSVVIIKFII ACYFRWTVAR KQGAYIVDNK 420 421 TMDKHTNDIE DWSNNIQTKA PLKEVDPHLR PKKYSKKSLG HKRASTFDLL K |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [544-627] |
1 11 21 31 41 51 | | | | | | 1 KHSSKMFQFN ESVIDLDTSM SSSLQSSGSY RGMTTMTTQN AWKLSNENKA VHSRNPSTLL 60 61 PTSSMFWNKA TSSPVPGSSL IQSL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.312 | d.93.1 | SH2 domain |
View | Download | 0.445 | d.15.2 | CAD & PB1 domains |
View | Download | 0.339 | d.45.1 | ClpS-like |
View | Download | 0.339 | a.59.1 | PAH2 domain |
View | Download | 0.478 | b.114.1 | N-utilization substance G protein NusG, insert domain |
View | Download | 0.311 | d.217.1 | SAND domain-like |
View | Download | 0.308 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
View | Download | 0.294 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
View | Download | 0.267 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
View | Download | 0.250 | a.3.1 | Cytochrome c |
View | Download | 0.210 | b.1.2 | Fibronectin type III |
Region A: Residues: [628-1165] |
1 11 21 31 41 51 | | | | | | 1 DSTIIHPDIV QQPPLDFMPY GFPLIHTICF VTCYSEDEEG LRTTLDSLST TDYPNSHKLL 60 61 MVVCDGLIKG SGNDKTTPEI ALGMMDDFVT PPDEVKPYSY VAVASGSKRH NMAKIYAGFY 120 121 KYDDSTIPPE NQQRVPIITI VKCGTPAEQG AAKPGNRGKR DSQIILMSFL EKITFDERMT 180 181 QLEFQLLKNI WQITGLMADF YETVLMVDAD TKVFPDALTH MVAEMVKDPL IMGLCGETKI 240 241 ANKAQSWVTA IQVFEYYISH HQAKAFESVF GSVTCLPGCF SMYRIKSPKG SDGYWVPVLA 300 301 NPDIVERYSD NVTNTLHKKN LLLLGEDRFL SSLMLKTFPK RKQVFVPKAA CKTIAPDKFK 360 361 VLLSQRRRWI NSTVHNLFEL VLIRDLCGTF CFSMQFVIGI ELIGTMVLPL AICFTIYVII 420 421 FAIVSKPTPV ITLVLLAIIL GLPGLIVVIT ATRWSYLWWM CVYICALPIW NFVLPSYAYW 480 481 KFDDFSWGDT RTIAGGNKKA QDENEGEFDH SKIKMRTWRE FEREDILNRK EESDSFVA |
Detection Method: | |
Confidence: | 1000.0 |
Match: | PF03142 |
Description: | Chitin synthase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [642-739] |
1 11 21 31 41 51 | | | | | | 1 LDFMPYGFPL IHTICFVTCY SEDEEGLRTT LDSLSTTDYP NSHKLLMVVC DGLIKGSGND 60 61 KTTPEIALGM MDDFVTPPDE VKPYSYVAVA SGSKRHNM |
Detection Method: | |
Confidence: | 5.075721 |
Match: | PF03142.6 |
Description: | No description for PF03142.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [740-984] |
1 11 21 31 41 51 | | | | | | 1 AKIYAGFYKY DDSTIPPENQ QRVPIITIVK CGTPAEQGAA KPGNRGKRDS QIILMSFLEK 60 61 ITFDERMTQL EFQLLKNIWQ ITGLMADFYE TVLMVDADTK VFPDALTHMV AEMVKDPLIM 120 121 GLCGETKIAN KAQSWVTAIQ VFEYYISHHQ AKAFESVFGS VTCLPGCFSM YRIKSPKGSD 180 181 GYWVPVLANP DIVERYSDNV TNTLHKKNLL LLGEDRFLSS LMLKTFPKRK QVFVPKAACK 240 241 TIAPD |
Detection Method: | |
Confidence: | 2.0 |
Match: | 1h7lA |
Description: | Spore coat polysaccharide biosynthesis protein SpsA |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transferase activity, transferring hexosyl groups | 2.23446625487311 | bayes_pls_golite062009 |
UDP-glycosyltransferase activity | 1.84596125277114 | bayes_pls_golite062009 |
catalytic activity | 1.73979371332125 | bayes_pls_golite062009 |
transferase activity | 1.18156663897445 | bayes_pls_golite062009 |
acetylgalactosaminyltransferase activity | 0.823843077041128 | bayes_pls_golite062009 |
cytidylyltransferase activity | 0.666765511953956 | bayes_pls_golite062009 |
nucleotidyltransferase activity | 0.641710647713692 | bayes_pls_golite062009 |
binding | 0.61043334112269 | bayes_pls_golite062009 |
polypeptide N-acetylgalactosaminyltransferase activity | 0.600389101620522 | bayes_pls_golite062009 |
transferase activity, transferring glycosyl groups | 0.539883035270389 | bayes_pls_golite062009 |
mannosyltransferase activity | 0.505948108814334 | bayes_pls_golite062009 |
transferase activity, transferring phosphorus-containing groups | 0.301396160525425 | bayes_pls_golite062009 |
UDP-N-acetylglucosamine diphosphorylase activity | 0.0309517682490415 | bayes_pls_golite062009 |
Region A: Residues: [985-1165] |
1 11 21 31 41 51 | | | | | | 1 KFKVLLSQRR RWINSTVHNL FELVLIRDLC GTFCFSMQFV IGIELIGTMV LPLAICFTIY 60 61 VIIFAIVSKP TPVITLVLLA IILGLPGLIV VITATRWSYL WWMCVYICAL PIWNFVLPSY 120 121 AYWKFDDFSW GDTRTIAGGN KKAQDENEGE FDHSKIKMRT WREFEREDIL NRKEESDSFV 180 181 A |
Detection Method: | |
Confidence: | 14.744727 |
Match: | PF03142.6 |
Description: | No description for PF03142.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.