YRC Public Data Repository - Protein Structure Prediction

Protein:	POA1
Organism:	Saccharomyces cerevisiae
Length:	177 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POA1.

Description	E-value	Query Range	Subject Range
POA1_YEAST - ADP-ribose 1''-phosphate phosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POA... POA1 - Phosphatase that is highly specific for ADP-ribose 1''-phosphate, a tRNA splicing metabolite; may ha... POA1_YEAS7 - ADP-ribose 1''-phosphate phosphatase OS=Saccharomyces cerevisiae (strain YJM789) GN=POA1 PE=3 SV=1 gi\|190408807 - gi\|190408807\|gb\|EDV12072.1\| small molecule phosphatase [Saccharomyces cerevisiae RM11-1a] gi\|207347786 - gi\|207347786\|gb\|EDZ73853.1\| YBR022Wp-like protein [Saccharomyces cerevisiae AWRI1631]	0.0	[1..177]	[1..177]
Y06D_BPT4 - Uncharacterized 17.5 kDa protein in tk-vs intergenic region OS=Enterobacteria phage T4 GN=y06D PE=3 ...	0.002	[4..87]	[3..107]
gi\|121491617, gi... - gi\|121635970\|ref\|YP_976193.1\| hypothetical protein BCG_0091 [Mycobacterium bovis BCG str. Pasteur 11... gi\|31616822, gi\|... - gi\|31791237\|ref\|NP_853730.1\| hypothetical protein Mb0061 [Mycobacterium bovis AF2122/97], gi\|3161682... gi\|7476184 - pir\|\|E70847 hypothetical protein Rv0060 - Mycobacterium tuberculosis (strain H37RV) gi\|13879110, gi\|... - gi\|15839437\|ref\|NP_334474.1\| hypothetical protein MT0066 [Mycobacterium tuberculosis CDC1551], gi\|13... gi\|2808717, gi\|1... - gi\|2808717\|emb\|CAA16241.1\| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv], gi\|156... gi\|148821250, gi... - gi\|76786113\|ref\|ZP_00773273.1\| COG2110: Predicted phosphatase homologous to the C-terminal domain of... gi\|253796975, gi... - gi\|253796975\|ref\|YP_003029976.1\| hypothetical protein TBMG_00059 [Mycobacterium tuberculosis KZN 143... gi\|81252482, gi\|... - gi\|81252482\|ref\|ZP_00877069.1\| COG2110: Predicted phosphatase homologous to the C-terminal domain of... gi\|254548991 - gi\|254548991\|ref\|ZP_05139438.1\| hypothetical protein Mtube_00756 [Mycobacterium tuberculosis '98-R60... gi\|215406048 - gi\|215406048\|ref\|ZP_03418229.1\| hypothetical protein Mtub0_20646 [Mycobacterium tuberculosis 02_1987... gi\|254817781 - gi\|254817781\|ref\|ZP_05222782.1\| hypothetical protein MtubKZN_19144 [Mycobacterium tuberculosis KZN 4... gi\|254366518, gi... - gi\|254366518\|ref\|ZP_04982562.1\| conserved hypothetical protein [Mycobacterium tuberculosis str. Haar... gi\|215432969 - gi\|215432969\|ref\|ZP_03430888.1\| hypothetical protein MtubE_20489 [Mycobacterium tuberculosis EAS054] gi\|148503972, gi... - gi\|148659820\|ref\|YP_001281343.1\| hypothetical protein MRA_0062 [Mycobacterium tuberculosis H37Ra], g... gi\|215413920 - gi\|215413920\|ref\|ZP_03422582.1\| hypothetical protein Mtub9_21298 [Mycobacterium tuberculosis 94_M424... gi\|219555838 - gi\|219555838\|ref\|ZP_03534914.1\| hypothetical protein MtubT1_00480 [Mycobacterium tuberculosis T17] gi\|218755782 - gi\|218755782\|ref\|ZP_03534578.1\| hypothetical protein MtubG1_21154 [Mycobacterium tuberculosis GM 150... gi\|224771556, gi... - gi\|224988443\|ref\|YP_002643110.1\| hypothetical protein JTY_0061 [Mycobacterium bovis BCG str. Tokyo 1...	0.003	[4..64]	[2..59]

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Predicted Domain #1

Region A:
Residues: [1-177]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNITYVKGN ILKPKSYARI LIHSCNCNGS WGGGIAYQLA LRYPKAEKDY VEVCEKYGSN  60
   61 LLGKCILLPS YENSDLLICC LFTSSFGGSS HGEKQSILNY TKLALDKLKT FREAKDKTRT 120
  121 SEDSIGDYLN GHIKYPIGEY KLEMPQINSG IFGVPWKETE RVLEEFSGDM SFTVYQL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term	Confidence	Notes
binding	0.365054584574311	bayes_pls_golite062009
catalytic activity	0.193548258614069	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: