| Protein: | DSF2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 736 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DSF2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..736] | [1..736] |
|
|
1.0E-92 | [296..528] | [16..235] |
|
|
9.0E-6 | [313..459] | [1133..1280] |
|
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8.0E-4 | [290..465] | [146..330] |
|
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0.002 | [204..523] | [3..341] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MNQNLKNTSW ADRIGSDDQE RKANSSEVSQ SPPPNNSFES SMDSQFSYAH SNKSSISFES 60
61 IQTTERLLDK LDLSLEDELI LQEALLEEEN ASRNSQLSQT SGPTLCMPAS EFPSLRYRTN 120
121 PSPTYIQARD RSLIIDNLKE KDSTLRGKYS S
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [152-528] |
1 11 21 31 41 51
| | | | | |
1 GKVERHLPVK SRYSYIVEED YDSETFSGMK PQMNRNEKDY KYPNLENGNR STNRPNPFNF 60
61 EKYRIENTRL HHLYPTLISD NNTSVDNNAN SKNNRTTSNN INTSTKTDRI SEKQSCPNEF 120
121 TTTQKSNCLY RNGSSTSTNT SFSEVGQLSK PKTQSSFESE SSSFSKLKLT KSDTTTIKPS 180
181 PKRSNSSTST ITKTNTMTND ISLPPTPPYK AHKKKTSLNS LKKLFKSPRT RAKNKKDLES 240
241 EGSSPIRSAT NSLDFSGENI QLPSTSSTIN NSSPHLARYI FPPNPVFHFK TASTPQSSTD 300
301 KKKNSKARPN RTHLRTFSDF HTTEKDSKIG ELSALTEQSN KPYHPKVRRR TLSLDGMLPN 360
361 NSTQCMDSFS HKKEGSN
|
| Detection Method: | |
| Confidence: | 11.3 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [529-588] |
1 11 21 31 41 51
| | | | | |
1 ATSKCGKLKF HPEPYDNDES SHIGQAITMR HQGKLEESAQ RLKKACACGN KTAFLLYGLA 60
61
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.574 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.539 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.434 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.422 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.345 | a.4.1 | Homeodomain-like |
| View | Download | 0.304 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.302 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.290 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.284 | a.22.1 | Histone-fold |
| View | Download | 0.281 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.274 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.271 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.267 | a.28.1 | ACP-like |
| View | Download | 0.263 | d.58.49 | YajQ-like |
| View | Download | 0.254 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.244 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.244 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.221 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.205 | a.4.1 | Homeodomain-like |
| View | Download | 0.202 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
|
Region A: Residues: [589-642] |
1 11 21 31 41 51
| | | | | |
1 LRHGCGVDKN LKLSLGYLMA ATDIKSFAAE VLDLDINPLN FASMDDIPDI APEP
|
| Detection Method: | |
| Confidence: | 9.73 |
| Match: | 1klxA |
| Description: | Cysteine rich protein B (HcpB) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [643-736] |
1 11 21 31 41 51
| | | | | |
1 TAPALYECGM AYLKGLGMDH PDERKGLKFL EKAALLGHVD SMCLSGTIWS KTSNVKKRDL 60
61 ARAAAWFRIA DKKGANLLGS DWIYKEKYMK QGPK
|
| Detection Method: | |
| Confidence: | 9.73 |
| Match: | 1klxA |
| Description: | Cysteine rich protein B (HcpB) |
| Matching Structure (courtesy of the PDB): |
|
