YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YBL086C
Organism: Saccharomyces cerevisiae
Length: 466 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBL086C.

Description E-value Query
Range
Subject
Range
YBI6_YEAST - Uncharacterized protein YBL086C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBL086C ...
gi|190408905 - gi|190408905|gb|EDV12170.1| hypothetical protein SCRG_03044 [Saccharomyces cerevisiae RM11-1a]
YBL086C - Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell pe...
0.0 [1..466] [1..466]
SPCC1494.08c - conserved fungal protein
YQK8_SCHPO - Uncharacterized protein C1494.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1494...
4.0E-16 [8..352] [7..244]

Back

Predicted Domain #1
Region A:
Residues: [1-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFNHNSKAK RPKFLLDLQI KELVNIPQSS GYCYTKWRLK DGTGTSGHKV ALDGEHQTTS  60
   61 TQSRGTTKHV HVQHHRAQWN YSLDKPILVK LHLDKNGRFL KKILVLDVFF EFADANSSLT 120
  121 SSSSPNGKVK KTTYANATAL TATGNNSYSQ KITGKLLLGT VDIDITEYVK EDETPTTNRF 180
  181 LLKHSKVNSI INVSLQLKLV RGSYEDFNIS KSFTNGQLAN YRPGINTILD NTSELSSPTS 240
  241 TTNQMSPKNT FSNFNGIGTT VAKPGTNATG NSTSIKSPTS TNHKSSEMTT KPGLSTTISS 300
  301 SMSPLIESLY QKTFKLPWDP RPGEFTPREC VEDILQGGNG WAKNEKGINL IDLQALRLNE 360
  361 MEEEYYNPNY GNNLGNKASS WPPNPSDDGY STMGKREYLE KKQNWSHMSR AQRAKLRTHN 420
  421 DEDNENTAND KGSDKDNNSV EDNNPTDFLT DRIRENKNWS IITPSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle